Gene
| Gene Model ID | pfu_aug1.0_19.1_57916 |
|---|---|
| Locus | scaffold19.1 : 122686 ... 135991 : + |
| To GenomeBrowser | scaffold19.1:122686..135991 |
| Genes list of scaffold | scaffold19.1 |
| Synonym | pfu_aug2.0_103.1_10269 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19.1_57916.t1 | 1 | 1 | Band_3_cyto | 63 | 329 | 0.0 | 185.1 | 0.0 | 0.0 | 184.6 |
| pfu_aug1.0_19.1_57916.t1 | 1 | 1 | HCO3_cotransp | 375 | 799 | 0.0 | 531.8 | 0.0 | 0.0 | 531.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_19.1_57916.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19.1_57916.t1 atggagagtgtaacaatcacggtagaaaatcaagaaacggatccggacggtggaattccggttctccatgacgacatcaa cgatgggcctcatcatctattctgccaaatggacattctacgtaaatataatgatgacgtcatctggaaggaagcaagga gatgggtgaagtttgaggaggtctgggaggagaaaggtaaacgatggtccaagccacacgtgtcctcgctgtacatgcag tgtctcacagacttacacatgacactggtgtcacatccatgtgtagttgacgttgaggcagattccatgtttgacgtcgt tgatatattgttagatgaatggtcagagcatggaacactcaacgacatactttgcaatcatatccgggcagttctgctga aaaggcacaaacatcctcacgtgacccggaagcacatggctctacatgcgcgaaacagagaaatcgtagaactcgtcgtt ccgtctccggataaaaaacgaaagcggaatctgcataacacacagggtacagataatgcggggtatgactccgataattc cagcgaagggagcggaagtgaaggaaataataacagcaaatcacaaacggacttactggccttcggagctgagccaaatg acagattcaaaagaaagattcctgacggcgcagaagtagttaacataatggtgggcgtagtggacgaactacgaaataga ctttgtgcttttgtgcgcctacgcgaagcaagagatatcggtcccataacggaagtgacgttaccaacacgttttatttt tgtgatgttggttccgaggaaggaaattgacctggctgtggagatcggtcgctgcgtgggagcattgatgacggacgaga ttttcactgagatcgcctacaaattcacggacaaagttgaagtattatcagccattcaggatttcaccagtcatgtgaca gtcctgccacctgcgtgctgggatcctgccattagaatagaaccaccggaagttcttccgacgaaagaaaaatttcgcca aacgccaaacacgtttacttgtgaaaatggtggaaacgggaaatccagcgagggtcacgctgaccccacccttcaaagga ctggcaggagccaacattgggactacatgccggtcagattgtgggtggggctttggactgccttctttatgctagtcatc gttgcctttgatcttagtgcacttgttcgttatatcacacgatttacagaggaatccttcgctttcctcatcgccttgat cttcattgtcaaagcattccaaaaactgatagaaatagagcacaaaatgcctgtaacatttggcagtgtagacacaactc ctaaagactgcttctgcgtcatcttgaatacatcacatttacatttagtctcaaacgattccattagtgctacatcaact tttgatgtgatggacaccatttctgggaacttatcttccttaagaaataacacgagcagcaacagttctgaaggcatcat ggccgcgttgggttattgtgcagagcgcggaggaacactactcggaagtgggtgcaaagaggcagattacgttcctgatg tattctttctcagtatcttacttttcctgttcactttcggcatcgcgtacggattgacatccttcaaaaacagccatttc ttcccccaatttgtacgacaaactttgagtgactttgctgtgctgatagccatcgtagttatggtacttgtggactattt atgcggaattccaaccccgaaattgatggtgccatcagaatttaagccaacaagatcagatcgaggctggttcatcaacc ccatcagcccccagaatccctggtggatcgccattgccgcggcacttccggcgcttctttctatgattcttatatttatg gatcaacaaataacagccgttatcgttaataggagagaaaataaattaaaaaaaggaagcggctaccatttggacatgct ggtgctcgcggttctgatcgtcattctatcggtactcggattaccctggtttgtagctgccacggtatcggccattgcgc atgtcatgagtttgaagaaagagtccgagtgtacggcgcctggagagaaaccaacattcctgggtgtcagggaacagaga gtaacagctttattcgtgggaattcttagtggacttgcagtttttatcacatctgtcctaaggcacattccgatgcctgt actgtacggggtatttttctacatgggtgtgtcggcccttaggggaatgcagctgatgcagagactatccatattattca tgcctcagaagcaccaaccagattacatctacttacgtcatgtgccaattcccagggtgcacatgttcacattaatacaa ttcgtgtgtctggtgggattatggctcataaagagcttttctgaaacatccatgttcttcccgttactggtattagccat gtgttttgtcaggaagggtttggatctggtttacacccagtacgagttgctgtggattgatgacttattaccaggagcaa tggtggaaaatcatagcgattacccgccaactccaagaaacagcatcaggaaacccaaaccttacaggtctttgtctgta ccggcctatgccgacaaacaaccctctcccgtccggcagagaaaacacatccctcctgtccaccataaaactagtcttcc attcctcaacagaagtttgtctcatgaggcggctgagagaaaggcgtctctgtatgaagcgtttgggcctctttctgagc gcaaagtgtcgctgatgtcacttccgaccacgcccacttacgtcatagaaggcgatgccgaatcaggactgaggagtaga tactgcactgataagtgtagcactctgcattaa |
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Protein
| Protein ID | pfu_aug1.0_19.1_57916.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19.1_57916.t1 MESVTITVENQETDPDGGIPVLHDDINDGPHHLFCQMDILRKYNDDVIWKEARRWVKFEEVWEEKGKRWSKPHVSSLYMQ CLTDLHMTLVSHPCVVDVEADSMFDVVDILLDEWSEHGTLNDILCNHIRAVLLKRHKHPHVTRKHMALHARNREIVELVV PSPDKKRKRNLHNTQGTDNAGYDSDNSSEGSGSEGNNNSKSQTDLLAFGAEPNDRFKRKIPDGAEVVNIMVGVVDELRNR LCAFVRLREARDIGPITEVTLPTRFIFVMLVPRKEIDLAVEIGRCVGALMTDEIFTEIAYKFTDKVEVLSAIQDFTSHVT VLPPACWDPAIRIEPPEVLPTKEKFRQTPNTFTCENGGNGKSSEGHADPTLQRTGRSQHWDYMPVRLWVGLWTAFFMLVI VAFDLSALVRYITRFTEESFAFLIALIFIVKAFQKLIEIEHKMPVTFGSVDTTPKDCFCVILNTSHLHLVSNDSISATST FDVMDTISGNLSSLRNNTSSNSSEGIMAALGYCAERGGTLLGSGCKEADYVPDVFFLSILLFLFTFGIAYGLTSFKNSHF FPQFVRQTLSDFAVLIAIVVMVLVDYLCGIPTPKLMVPSEFKPTRSDRGWFINPISPQNPWWIAIAAALPALLSMILIFM DQQITAVIVNRRENKLKKGSGYHLDMLVLAVLIVILSVLGLPWFVAATVSAIAHVMSLKKESECTAPGEKPTFLGVREQR VTALFVGILSGLAVFITSVLRHIPMPVLYGVFFYMGVSALRGMQLMQRLSILFMPQKHQPDYIYLRHVPIPRVHMFTLIQ FVCLVGLWLIKSFSETSMFFPLLVLAMCFVRKGLDLVYTQYELLWIDDLLPGAMVENHSDYPPTPRNSIRKPKPYRSLSV PAYADKQPSPVRQRKHIPPVHHKTSLPFLNRSLSHEAAERKASLYEAFGPLSERKVSLMSLPTTPTYVIEGDAESGLRSR YCTDKCSTLH |
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