Gene
| Gene Model ID | pfu_aug1.0_1903.1_58684 |
|---|---|
| Locus | scaffold1903.1 : 1 ... 11698 : + |
| To GenomeBrowser | scaffold1903.1:1..11698 |
| Genes list of scaffold | scaffold1903.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1903.1_58684.t1 | 1 | 1 | Tim44 | 5 | 114 | 3.3e-19 | 69.3 | 6.0e-23 | 4.5e-19 | 68.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1903.1_58684.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1903.1_58684.t1 atttttttagtttcagggaaaataaagaaaaactgcatgagtattgtacagaacttgcataccctctaatgactcatgga atggaaaagaaaacattacgatggaagtttgtagaatccgttgaacctccacgacttgtccaagctcggacgatggaggc catcttgaaaaagaattactatgcccaagtcactgtgagatttcataccaaacagataatggcattgtacgatcagttcg gtcgactaatgtatggaagtaacagcatagtcaagaatatattagaatatattgtgtttgagaaacatatttccaatgtg tatggtaactggcgaattcactctaagatcgtacctgattggatgccagagggagatcctatcgtcaaaaccttcatttt agatcgtcctgagaaaccgccagaaaaagaggaagaggaagttttgagccaggaagccaaagagggagagaacgaagcaa aaggcaaagatcaaccaattgcagcatag |
|
Protein
| Protein ID | pfu_aug1.0_1903.1_58684.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1903.1_58684.t1 FFSFRENKEKLHEYCTELAYPLMTHGMEKKTLRWKFVESVEPPRLVQARTMEAILKKNYYAQVTVRFHTKQIMALYDQFG RLMYGSNSIVKNILEYIVFEKHISNVYGNWRIHSKIVPDWMPEGDPIVKTFILDRPEKPPEKEEEEVLSQEAKEGENEAK GKDQPIAA |
|