Gene
| Gene Model ID | pfu_aug1.0_1903.1_58685 |
|---|---|
| Locus | scaffold1903.1 : 12126 ... 27845 : - |
| To GenomeBrowser | scaffold1903.1:12126..27845 |
| Genes list of scaffold | scaffold1903.1 |
| Synonym | pfu_aug2.0_448.1_27403 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1903.1_58685.t1 | 3 | 1 | Mito_carr | 138 | 228 | 0.0 | 217.0 | 5.3e-29 | 7.9e-25 | 86.3 |
| pfu_aug1.0_1903.1_58685.t1 | 3 | 2 | Mito_carr | 237 | 327 | 0.0 | 217.0 | 2.5e-23 | 3.6e-19 | 68.2 |
| pfu_aug1.0_1903.1_58685.t1 | 3 | 3 | Mito_carr | 335 | 395 | 0.0 | 217.0 | 7.5e-21 | 1.1e-16 | 60.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1903.1_58685.t1 | gi|297473602|ref|XP_002686709.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1903.1_58685.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1903.1_58685.t1 atgcaattttggcgcgtttttcgtgacgtcatagataacgtgacgtcgattttggcgataagagagactccgaaaagcat tcggaaattggtaaattcctttacaaatgtcatatttgcagagttcatgaaaaatatcggttttatcagatttgccgata aaaaatcttttgaggagatgctgtaccaagcacaagagtttgctcaaataactccgctagaaattgatattctcttccaa ctggttggacttaaacaccagtcagggagagttagttatgatgatatttgtgacttatctcccctggagggtagagaaac cccgttcacattacagatgcagatagcacaggagaagattaactacgagcagcacacggagaggaccgtattattgcaga tagcggagaacgtctaccggtttgctctcggtgccttggcaggagcaactggagcaacagcggtgtatccgatagatctc gtcaaaaccagaatgcagaaccagagaactacctcaatggtcggagaattaatgtataaaaatagctttgactgcttcaa aaaggtgctacgacacgaaggattctttgggttatacagagggctggctcctcaactggtgggtgtcgccccggagaaag ccattaaacttacaatgaatgatttaatgagggacaagcttggaggtcgattccttaacaaggacggctctttaccttta tgggcagaaatggtggctggtggaactgcaggtgcctcccaggtcatgtttaccaatcccctagaaatcgtcaagatccg actccaggtggcaggagaagtagtcagtaaaggtcaaaaggtcagcgccattaaagtcgtccgtgaactcggatttctgg ggctttacaagggttctagggcatgttttctacgagacataccgttctcggctatatacttccctgcttatgctcgtaca aagaaatggctggctgatgagaacggctataattctcccggtactctactcctggctgccactatagcaggtatgccagc cgcagctattcccacaccagctgatgtgattaagacacgtctccaggtacaagctcgtacaggtcaaaccgcgtataacg gtgttatagactgtgtacggaaaatctggaaagaggagggaggctgggccttctggaaaggcactccaggtaaggacttt actggcattgttgattga |
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Protein
| Protein ID | pfu_aug1.0_1903.1_58685.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1903.1_58685.t1 MQFWRVFRDVIDNVTSILAIRETPKSIRKLVNSFTNVIFAEFMKNIGFIRFADKKSFEEMLYQAQEFAQITPLEIDILFQ LVGLKHQSGRVSYDDICDLSPLEGRETPFTLQMQIAQEKINYEQHTERTVLLQIAENVYRFALGALAGATGATAVYPIDL VKTRMQNQRTTSMVGELMYKNSFDCFKKVLRHEGFFGLYRGLAPQLVGVAPEKAIKLTMNDLMRDKLGGRFLNKDGSLPL WAEMVAGGTAGASQVMFTNPLEIVKIRLQVAGEVVSKGQKVSAIKVVRELGFLGLYKGSRACFLRDIPFSAIYFPAYART KKWLADENGYNSPGTLLLAATIAGMPAAAIPTPADVIKTRLQVQARTGQTAYNGVIDCVRKIWKEEGGWAFWKGTPGKDF TGIVD |
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