Gene
| Gene Model ID | pfu_aug1.0_1903.1_58686 |
|---|---|
| Locus | scaffold1903.1 : 39826 ... 42895 : + |
| To GenomeBrowser | scaffold1903.1:39826..42895 |
| Genes list of scaffold | scaffold1903.1 |
| Synonym | pfu_aug2.0_448.1_27404 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1903.1_58686.t1 | 1 | 1 | Hat1_N | 5 | 75 | 3.7e-16 | 59.6 | 6.6e-20 | 4.9e-16 | 59.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1903.1_58686.t1 | gi|260816467|ref|XP_002602992.1| | hypothetical protein BRAFLDRAFT_123972 [Branchiostoma floridae] | 2.0e-38 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1903.1_58686.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1903.1_58686.t1 atggccaaggaactggcaccaggattcttgaccaacaaagaggagttcctacgtagattgccagaggacgctaattttaa accatttggagatctgaaacattcatataaagtcatcaaagataacgaagagagacattttgaggtgtataacaccgata tcgagtcaccaggattccgagcgtaccatgaacgattacagacgtttttgctgtttttcatcgacgcagcctcgttcata gacgctgacgatgagagatggaacttttatcttctatttgagagatacaagtccaatggcaatccaatgtatgcaatagc tggttacatgacggtgtacaattactacgcctatccagaaaaaataagaccaagaattaggttaatatgcacattatga |
|
Protein
| Protein ID | pfu_aug1.0_1903.1_58686.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1903.1_58686.t1 MAKELAPGFLTNKEEFLRRLPEDANFKPFGDLKHSYKVIKDNEERHFEVYNTDIESPGFRAYHERLQTFLLFFIDAASFI DADDERWNFYLLFERYKSNGNPMYAIAGYMTVYNYYAYPEKIRPRIRLICTL |
|