Gene
| Gene Model ID | pfu_aug1.0_1907.1_22790 |
|---|---|
| Locus | scaffold1907.1 : 2473 ... 24325 : - |
| To GenomeBrowser | scaffold1907.1:2473..24325 |
| Genes list of scaffold | scaffold1907.1 |
| Synonym | pfu_aug2.0_563.1_10938 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1907.1_22790.t1 | 2 | 1 | SSF | 39 | 128 | 1.0e-07 | 31.0 | 3.8e-10 | 2.8e-06 | 26.2 |
| pfu_aug1.0_1907.1_22790.t1 | 2 | 2 | SSF | 156 | 199 | 1.0e-07 | 31.0 | 0.00022 | 1.7 | 7.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1907.1_22790.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1907.1_22790.t1 atggcagttaatatcccaggacttatttctatcatcgtcttctacttgctcatcctcgtcatcggaatatgggcgtccag gaaaataaaaggaaaacatgacacagagaaccttatgctggcaggacgaaacattggacttttggttggaatcttcacaa tgacggccacatgggttggaggtggattcataaacgggacaacagaagtaatatacacaagtggtttagtgtggtgccag gctcctgttggatactcactcagtcttgttcttggaggagctttctttgccgatagaatgagatcaaagcgatacactac agttcttgaccccttctctgagcgatatggagagagaatgggaggtttactatacataccagctcttatgggagacgtat tctggtcgggtgccatcttggctgcattagatcaccagcaagtaggatactacattgattcggggctacttttgatgttt ggaggtattccatggcaggtgtactttcaaagggtcctctcggcaaccagtgcaaagaatgcgcaaattctctcttatac tgccggaatcggctgtattgtgatgtccattccttctttactgattggtgcggctgctgtaaatgcaggtttgtttcgat aa |
|
Protein
| Protein ID | pfu_aug1.0_1907.1_22790.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1907.1_22790.t1 MAVNIPGLISIIVFYLLILVIGIWASRKIKGKHDTENLMLAGRNIGLLVGIFTMTATWVGGGFINGTTEVIYTSGLVWCQ APVGYSLSLVLGGAFFADRMRSKRYTTVLDPFSERYGERMGGLLYIPALMGDVFWSGAILAALDHQQVGYYIDSGLLLMF GGIPWQVYFQRVLSATSAKNAQILSYTAGIGCIVMSIPSLLIGAAAVNAGLFR |
|