Gene
| Gene Model ID | pfu_aug1.0_1907.1_22791 |
|---|---|
| Locus | scaffold1907.1 : 25424 ... 32685 : - |
| To GenomeBrowser | scaffold1907.1:25424..32685 |
| Genes list of scaffold | scaffold1907.1 |
| Synonym | pfu_aug2.0_563.1_10937 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1907.1_22791.t1 | 1 | 1 | SSF | 58 | 349 | 2.3e-29 | 102.2 | 2.4e-33 | 3.6e-29 | 101.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1907.1_22791.t1 | gi|260816884|ref|XP_002603317.1| | hypothetical protein BRAFLDRAFT_119697 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1907.1_22791.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1907.1_22791.t1 atggctatcaacgttcccggactcgtctctatcatcgtcttctacatcatcatcctcgtcattggattattggcagcaag aaaggctcgaggaaaacaaaatagtgagaatctgatgctggcaggacgggatatagggttactggtaggagtctttacaa tgacaggtgccactcttacagtgataatagaccttgaccaaaatatcgccattattgtgtcggcagccattgctatgatg tacacattgtttggtggcctatactctgtcgcatacactgacgtcattcaacttatttgcatattcattggactgtggtt atcaatcccttttgcattcatgaatgagaatgttggagacatcacaaatatgacggcatcaatcttgccgaatacaacta cagactggataaaggagctggatcctaagtacgtgggtctgtacatggactcaggactcctcctgatgtttggaggtata ccgtggcaggtgtatttccagagggttctatcagctcggagctcattcaatgcccaggtcttgtcgtttgctgcagcttt tggatgcgtggcgatggcagtgccctctgttcttattggtgccatagcaacaaacacaaactggaatggtacagattacg gcaaggcggagattccagatgctgagaaacagaacgttcttcccttagtattgcagtacctgactcctgtatgggtgtcc ttcataggtctaggtgctgtgtcggctgctgtcatgtcgtctgcagactcgtccatcctgtcatctagcgccatgtttgc taggaacgtctacaaaatgattttcagacaaaaggcttctgaacgagagatagtgtgggtaatgcgtttggccgtgttgg gagtagcggccttggctacaatcatggccatcaccgtgaagtcaatatacacactgtggttcctgtgttcagaccttgtc tatgtgactgtgttcccccagctcctgtgtgtcatctacctacccttcaccaacacatatggatctctgatcagcttcat tctggggatatttctacgtttaagtggtggggagtccgtgctgaacatacctccgctgatagagtatccgtactacacag aggctgatggccagctgttcccatacaaaacactatgtatgctcgtgtcttttacctgcataatactcatttcattactg accaatttgctatttgagaaagaaattcttcccagatatctcgacgttttcaagtgtgtaccagagaaaggaatagaagt gaagttgacggccctaaaactttacaaaccagatgatggtcaaacaaatccgggttttacagacatcagagatgtaacat catgttga |
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Protein
| Protein ID | pfu_aug1.0_1907.1_22791.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1907.1_22791.t1 MAINVPGLVSIIVFYIIILVIGLLAARKARGKQNSENLMLAGRDIGLLVGVFTMTGATLTVIIDLDQNIAIIVSAAIAMM YTLFGGLYSVAYTDVIQLICIFIGLWLSIPFAFMNENVGDITNMTASILPNTTTDWIKELDPKYVGLYMDSGLLLMFGGI PWQVYFQRVLSARSSFNAQVLSFAAAFGCVAMAVPSVLIGAIATNTNWNGTDYGKAEIPDAEKQNVLPLVLQYLTPVWVS FIGLGAVSAAVMSSADSSILSSSAMFARNVYKMIFRQKASEREIVWVMRLAVLGVAALATIMAITVKSIYTLWFLCSDLV YVTVFPQLLCVIYLPFTNTYGSLISFILGIFLRLSGGESVLNIPPLIEYPYYTEADGQLFPYKTLCMLVSFTCIILISLL TNLLFEKEILPRYLDVFKCVPEKGIEVKLTALKLYKPDDGQTNPGFTDIRDVTSC |
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