Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_19109.1_47274
Locus scaffold19109.1 : 6340 ... 10606 : -
To GenomeBrowser scaffold19109.1:6340..10606
Genes list of scaffold scaffold19109.1
Synonym pfu_aug2.0_812.1_07913

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_19109.1_47274.t1 1 1 polyprenyl_synt 3 82 1.7e-14 53.3 2.7e-18 2.0e-14 53.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_19109.1_47274.t1 gi|340375308|ref|XP_003386178.1| 5.0e-21

Transcript
Transcript IDpfu_aug1.0_19109.1_47274.t1
Definition-
>pfu_aug1.0_19109.1_47274.t1
accacgatgaagacggtgacaggtcagtgcctggacttgatcacagcacctgtgaacagtggtgtagatttcacaaagtt
tacagaggagagatacgatgctatcgttcagtggaaaacagcgtactactcattctatctccctgtggcactggccatgt
gtatggctggacggacagatgtggacgaccttgacaaagctcagtctatcttactcattatgggaagatacttccaaata
caggatatatcattgagaagcatcattctgaagtactatgaaatgtaccataccacagccatgtag

Protein
Protein IDpfu_aug1.0_19109.1_47274.t1
Definition-
>pfu_aug1.0_19109.1_47274.t1
TTMKTVTGQCLDLITAPVNSGVDFTKFTEERYDAIVQWKTAYYSFYLPVALAMCMAGRTDVDDLDKAQSILLIMGRYFQI
QDISLRSIILKYYEMYHTTAM

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