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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_19111.1_40122
Locus scaffold19111.1 : 1 ... 3785 : -
To GenomeBrowser scaffold19111.1:1..3785
Genes list of scaffold scaffold19111.1
Synonym pfu_aug2.0_1237.1_24798

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_19111.1_40122.t1 gi|328720911|ref|XP_001948965.2| PREDICTED: eukaryotic translation initiation factor 4B [Acyrthosiphon pisum] 2.0e-11

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_19111.1_40122.t1
Definition-
>pfu_aug1.0_19111.1_40122.t1
atgatacccttttatcgggttagcagtttcatcttactaattagcacgttcacagtagcacaatatgatcaatataaaac
tattgataaagatcccagtgcgcttgaatctgaagaaacggcagacgatgatgccaatctggcagacgacaaagtaaaac
gaccattcggaggtatttttgggaaaccttacaacattggtaagcgtccgttcggatcaattttccaccaagactatgat
gtcgggaagaggccattcggaggatcatattcaaatccttacaaaataggcaaaaggccgttcggaggttcttatgggaa
ttccttcaaagtgggaaagaggccttttggaagttcctatagtaaatcgtttatgattggcaaaaggcctttcggtggta
cgtataaaagttggtttaaaatggggaaaagaccatttggagggtcttacagagggtcatttaaggtaggaaaacggccc
ttcagtacatacggcggttcatttggtttgg

Protein
Protein IDpfu_aug1.0_19111.1_40122.t1
Definition-
>pfu_aug1.0_19111.1_40122.t1
MIPFYRVSSFILLISTFTVAQYDQYKTIDKDPSALESEETADDDANLADDKVKRPFGGIFGKPYNIGKRPFGSIFHQDYD
VGKRPFGGSYSNPYKIGKRPFGGSYGNSFKVGKRPFGSSYSKSFMIGKRPFGGTYKSWFKMGKRPFGGSYRGSFKVGKRP
FSTYGGSFGL

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