Gene
| Gene Model ID | pfu_aug1.0_1912.1_00883 |
|---|---|
| Locus | scaffold1912.1 : 36396 ... 54535 : + |
| To GenomeBrowser | scaffold1912.1:36396..54535 |
| Genes list of scaffold | scaffold1912.1 |
| Synonym | pfu_aug2.0_1813.1_11879 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1912.1_00883.t1 | 3 | 1 | Slu7 | 9 | 54 | 0.0 | 231.0 | 0.17 | 630.0 | -0.1 |
| pfu_aug1.0_1912.1_00883.t1 | 2 | 1 | Dehydrin | 86 | 388 | 5.6e-10 | 39.7 | 2.4e-05 | 0.091 | 13.0 |
| pfu_aug1.0_1912.1_00883.t1 | 3 | 2 | Slu7 | 159 | 400 | 0.0 | 231.0 | 0.0 | 0.0 | 231.0 |
| pfu_aug1.0_1912.1_00883.t1 | 2 | 2 | Dehydrin | 444 | 503 | 5.6e-10 | 39.7 | 9.9e-05 | 0.37 | 11.1 |
| pfu_aug1.0_1912.1_00883.t1 | 3 | 3 | Slu7 | 459 | 503 | 0.0 | 231.0 | 0.022 | 82.0 | 2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1912.1_00883.t1 | gi|326928404|ref|XP_003210370.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1912.1_00883.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1912.1_00883.t1 atgtcgttcactctgaacttggcgccctctgtggtggccaagcaggccaagtccgaggagcaggatgaaccaaagaaaaa gtctcgggaagactggcgtaaacagaaagaactggaggagatgagaaaagccggtacagctccagcaatgaccgatgagc ttggaaaagaaattaacccacacatcccccagtatattatgcaggccccatggtattataatgttactcaagccaccctt aaacatcaaaggcaacaagaagacaaaatcaaggaattcacaaagatgggcaactggtacaagaaaggagtgaaagaggg gccagtggcaaccaagtttagaaagggagcatgtgaaaattgtggagcaattacacacaaaaagaaagactgtcttgaga gacccagaaaaatcggtgctaaatacacaggtgaagatatggccccagacgagtacatccaaccacagctagactttgat tttgacggtaaacgagatcggtggaacggaaaagatattgacgaccatcaagcacaagttaaggaagattttgagaggat agaggaggcaaaaagaatgctgaaagaacagaattttatgcagggagaaaaagaggcagaggaaaagaaaaaagacggca gtgaagatgaagataaatatggagatgacgtagacatgcagggtcagaagtttgaaaccaaacaaagaatcaccgttaga aatctacgtatcagagaagatacggctaagtatttatacaatctggatccaaattcagcattttacgatcctaagacgag atccatgagagagaatccgtttaaaaaccaaaacaaagaattagctgaaaaatatgtgggagataatttcgtcagatttt ctgtatttgcatggaatgcctacgagagaggaacagaggtgcatttacaagccgatccaacaaaattagaactactcagt aaagaagtggacaaacggaaagaaaactttaaaacttccgctaaagacagtatactcgataaatatggaggggaggaaca tttacaggccccgcccaagcaattgttattagctcaaacagaagactacgtggagtattctcgtcacggttcagtgatca agggtaacgagaaagctaaaatatgttctaaatatgaggaagatgtttatatcaataatcacacaagtgtatggggatct tactggaaagatggtcaatggggatataagtgctgccactccttaatcaaggaggcatattgtacaggagaaaaaggaat agaagcaagtcagtctgatatattggcaattgaaaacagttctcaggtagaagaggaggaggaagaagaagaagaaccca agtcattattagagcaacaccaagaaaaaatgaaagagaagagtaagaaaaagaagaagaaaaagaagagtaagaagaag cacaagaagaaggaaagcagcagctctgaatcagagtctgaagatgaagaaaaggagaaagagagaaaacttaaagagaa agccatccactgcaagtatgacatcgtcatcagactgaaagtgggtgtcagaaatagctgctctcagttttgggaatag |
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Protein
| Protein ID | pfu_aug1.0_1912.1_00883.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1912.1_00883.t1 MSFTLNLAPSVVAKQAKSEEQDEPKKKSREDWRKQKELEEMRKAGTAPAMTDELGKEINPHIPQYIMQAPWYYNVTQATL KHQRQQEDKIKEFTKMGNWYKKGVKEGPVATKFRKGACENCGAITHKKKDCLERPRKIGAKYTGEDMAPDEYIQPQLDFD FDGKRDRWNGKDIDDHQAQVKEDFERIEEAKRMLKEQNFMQGEKEAEEKKKDGSEDEDKYGDDVDMQGQKFETKQRITVR NLRIREDTAKYLYNLDPNSAFYDPKTRSMRENPFKNQNKELAEKYVGDNFVRFSVFAWNAYERGTEVHLQADPTKLELLS KEVDKRKENFKTSAKDSILDKYGGEEHLQAPPKQLLLAQTEDYVEYSRHGSVIKGNEKAKICSKYEEDVYINNHTSVWGS YWKDGQWGYKCCHSLIKEAYCTGEKGIEASQSDILAIENSSQVEEEEEEEEEPKSLLEQHQEKMKEKSKKKKKKKKSKKK HKKKESSSSESESEDEEKEKERKLKEKAIHCKYDIVIRLKVGVRNSCSQFWE |
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