Gene
| Gene Model ID | pfu_aug1.0_1912.1_00884 |
|---|---|
| Locus | scaffold1912.1 : 57194 ... 61475 : - |
| To GenomeBrowser | scaffold1912.1:57194..61475 |
| Genes list of scaffold | scaffold1912.1 |
| Synonym | pfu_aug2.0_228.1_27070 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1912.1_00884.t1 | 5 | 1 | zf-H2C2_2 | 103 | 116 | 6.4e-08 | 32.5 | 0.051 | 150.0 | 2.9 |
| pfu_aug1.0_1912.1_00884.t1 | 3 | 1 | zf-H2C2_5 | 106 | 128 | 1.1e-10 | 41.0 | 6.0e-07 | 0.0018 | 18.4 |
| pfu_aug1.0_1912.1_00884.t1 | 5 | 2 | zf-H2C2_2 | 121 | 143 | 6.4e-08 | 32.5 | 8.7e-06 | 0.026 | 14.8 |
| pfu_aug1.0_1912.1_00884.t1 | 3 | 2 | zf-H2C2_5 | 135 | 156 | 1.1e-10 | 41.0 | 3.7e-07 | 0.0011 | 19.0 |
| pfu_aug1.0_1912.1_00884.t1 | 5 | 3 | zf-H2C2_2 | 148 | 173 | 6.4e-08 | 32.5 | 8.5e-07 | 0.0025 | 18.0 |
| pfu_aug1.0_1912.1_00884.t1 | 3 | 3 | zf-H2C2_5 | 165 | 189 | 1.1e-10 | 41.0 | 4.0e-05 | 0.12 | 12.6 |
| pfu_aug1.0_1912.1_00884.t1 | 5 | 4 | zf-H2C2_2 | 509 | 516 | 6.4e-08 | 32.5 | 0.52 | 1500.0 | -0.3 |
| pfu_aug1.0_1912.1_00884.t1 | 5 | 5 | zf-H2C2_2 | 523 | 545 | 6.4e-08 | 32.5 | 0.001 | 3.0 | 8.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1912.1_00884.t1 | gi|307166389|gb|EFN60526.1| | Protein hunchback [Camponotus floridanus] | 3.0e-14 |
Transcript
| Transcript ID | pfu_aug1.0_1912.1_00884.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1912.1_00884.t1 atggcagatgatacaaacatcccaggcaagtctcaaactctgatggaccaagacgagcctggcccggatagtgcaatggc ccagttattactggccagctcgatggcccaacgggatatggccatcgaggaatccttgagggtacagaactctgcaaacg ttccaaccagtaaccgcatcaacgactcgccacaaccgtcctcctggcattcggataatattgaccccggtgacgatgca gcgacatattccctaccggactcctccccagaggatctgtccgtagactcgatgctggattctccgaccaaagtctatag gtgtcgcctctgtagctttaacactagtacttacacacaacttcaattgcatatgccaaaacatggaggggtgaaagcat taaaatgtccaatgtgtgactattccaccaatgacaaaagtaattttcgtagacatcgacggctgcacatgggaaacaat ccagtgagcgtcttcaaatgtggaaagtgctcgttttcaacaatcatgctacgaaaattcaaagaacattgtagtcaggt tcacaatgaagatctgttgcatgtgccaaactctcacgtaagtcacatgacctttgcaccgcccacttacactgatggag tggatcggacattgacgttaaacccacctttagatctgcaacatccaagccatcatcaaagttcgcttcatgggaatttt tcagcatctaatgcacttcattctctgttgacggggatacacccccctgccccgctatataggcgtcagacttaccctgc ccagagtatcggtcaatatggtacatacttgccccctatgggacaagtgaacgaggaaaatcacatggcctcaaattact tacgctcaattgtatcgtctattatgaatacccacccaccccctcgtataccccccagtagtactattacatcatcaaac tattacttatcgtctgctcagcgtgaaccacatttatcatcaagtacacatacggctatgatgagtgacttacaaagcag agtgaaagtgaaagtagaaccacctgagcgtgacagcacaccagatgtttcaagttctgcattacctgtccacccccatg ttcttaataaaccgagtgctactttgaatgttcatccatattcaagacgattttccgatcctagccacagcattaatact gctgaaaataacgaagcatcacaatcattagaaatggtacgaccaaattctactgagtcggaacaatcttacagacaaga accacgatcaagtgtcgataacacggtcaatacaacggttaagtcagaactcgtaagtgtaggtattcagtgctcggtgc agagaatgaagatggagacggatataaatagaaaccacagtatttttggctcaaatgttgatcagggtgtccagtgtgaa ttaatcactgcaaccggtagaaggacgcaaagatcgttatcggtaacgagcgagtccggaagcagtgaacagcaaggcaa tcgatgcatacactgcggtgtaactttcgacgatgaagtattatactcgattcacataggctgccatagccacaccgatc ctttcgtgtgtaacgtttgcggaaaacaatgtggaaataaatacggattttattcacatatcatgagagggcaccactat tga |
|
Protein
| Protein ID | pfu_aug1.0_1912.1_00884.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1912.1_00884.t1 MADDTNIPGKSQTLMDQDEPGPDSAMAQLLLASSMAQRDMAIEESLRVQNSANVPTSNRINDSPQPSSWHSDNIDPGDDA ATYSLPDSSPEDLSVDSMLDSPTKVYRCRLCSFNTSTYTQLQLHMPKHGGVKALKCPMCDYSTNDKSNFRRHRRLHMGNN PVSVFKCGKCSFSTIMLRKFKEHCSQVHNEDLLHVPNSHVSHMTFAPPTYTDGVDRTLTLNPPLDLQHPSHHQSSLHGNF SASNALHSLLTGIHPPAPLYRRQTYPAQSIGQYGTYLPPMGQVNEENHMASNYLRSIVSSIMNTHPPPRIPPSSTITSSN YYLSSAQREPHLSSSTHTAMMSDLQSRVKVKVEPPERDSTPDVSSSALPVHPHVLNKPSATLNVHPYSRRFSDPSHSINT AENNEASQSLEMVRPNSTESEQSYRQEPRSSVDNTVNTTVKSELVSVGIQCSVQRMKMETDINRNHSIFGSNVDQGVQCE LITATGRRTQRSLSVTSESGSSEQQGNRCIHCGVTFDDEVLYSIHIGCHSHTDPFVCNVCGKQCGNKYGFYSHIMRGHHY |
|