Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_19125.1_69241
Locus scaffold19125.1 : 1 ... 10599 : -
To GenomeBrowser scaffold19125.1:1..10599
Genes list of scaffold scaffold19125.1
Synonym pfu_aug2.0_61.1_03528

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_19125.1_69241.t1 2 1 MIF4G 1 89 2.2e-30 105.6 7.4e-34 2.2e-30 105.6
pfu_aug1.0_19125.1_69241.t1 2 2 MIF4G 100 117 2.2e-30 105.6 0.36 1100.0 -1.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_19125.1_69241.t1 gi|224060725|ref|XP_002192226.1| 0.0

Transcript
Transcript IDpfu_aug1.0_19125.1_69241.t1
Definition-
>pfu_aug1.0_19125.1_69241.t1
atttataggagaattattcaaactcaagatgttaacagagaatattatgcatgactgtttgttcaaactgttacgggcga
aggatgaggagagtttagaatgtttgtgccgacttctgttcactatcggcaaggagttagataccgacaaggccaagcct
aggatggatcagtactttaaccagatggaaaagatagtatcagagaagaagacttcatccagagttagatttatgttaca
agatgtgatagagctgaggctgaataaatggattccccgacgtgacgaaaacaaccccaagacgctggaccagatccata
aagaggctcagagagaggaacaagaaagacaaatcttcttacagcaagctcaacaacaacaaaaagtacagggtggatca
aggggcggtggcccaaggg

Protein
Protein IDpfu_aug1.0_19125.1_69241.t1
Definition-
>pfu_aug1.0_19125.1_69241.t1
FIGELFKLKMLTENIMHDCLFKLLRAKDEESLECLCRLLFTIGKELDTDKAKPRMDQYFNQMEKIVSEKKTSSRVRFMLQ
DVIELRLNKWIPRRDENNPKTLDQIHKEAQREEQERQIFLQQAQQQQKVQGGSRGGGPR

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495