Gene
| Gene Model ID | pfu_aug1.0_191288.1_14136 |
|---|---|
| Locus | scaffold191288.1 : 39 ... 781 : + |
| To GenomeBrowser | scaffold191288.1:39..781 |
| Genes list of scaffold | scaffold191288.1 |
| Synonym | NA |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | CaLP-related protein |
| Description | Blast best hit to DDBJ AY663847 (Pinctada fucata) |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_191288.1_14136.t1 | 2 | 1 | EF-hand_8 | 1 | 39 | 2.4e-15 | 55.8 | 3.8e-14 | 5.1e-11 | 42.0 |
| pfu_aug1.0_191288.1_14136.t1 | 2 | 1 | EF-hand_9 | 3 | 39 | 5.0e-06 | 26.3 | 2.6e-08 | 3.5e-05 | 23.6 |
| pfu_aug1.0_191288.1_14136.t1 | 2 | 1 | EF-hand_7 | 7 | 37 | 1.3e-08 | 34.8 | 2.3e-09 | 3.1e-06 | 27.2 |
| pfu_aug1.0_191288.1_14136.t1 | 2 | 1 | EF-hand_1 | 12 | 39 | 1.1e-11 | 43.1 | 1.9e-11 | 2.5e-08 | 32.6 |
| pfu_aug1.0_191288.1_14136.t1 | 2 | 1 | EF-hand_6 | 12 | 39 | 7.6e-09 | 34.7 | 2.4e-08 | 3.3e-05 | 23.4 |
| pfu_aug1.0_191288.1_14136.t1 | 2 | 1 | EF-hand_5 | 13 | 37 | 4.3e-06 | 25.8 | 2.9e-07 | 0.00039 | 19.6 |
| pfu_aug1.0_191288.1_14136.t1 | 2 | 2 | EF-hand_8 | 46 | 63 | 2.4e-15 | 55.8 | 1.0e-05 | 0.014 | 14.9 |
| pfu_aug1.0_191288.1_14136.t1 | 2 | 2 | EF-hand_1 | 49 | 64 | 1.1e-11 | 43.1 | 1.9e-05 | 0.025 | 13.8 |
| pfu_aug1.0_191288.1_14136.t1 | 2 | 2 | EF-hand_6 | 49 | 64 | 7.6e-09 | 34.7 | 3.3e-05 | 0.044 | 13.6 |
| pfu_aug1.0_191288.1_14136.t1 | 2 | 2 | EF-hand_7 | 50 | 63 | 1.3e-08 | 34.8 | 0.0017 | 2.3 | 8.4 |
| pfu_aug1.0_191288.1_14136.t1 | 2 | 2 | EF-hand_5 | 50 | 63 | 4.3e-06 | 25.8 | 0.00087 | 1.2 | 8.6 |
| pfu_aug1.0_191288.1_14136.t1 | 2 | 2 | EF-hand_9 | 53 | 63 | 5.0e-06 | 26.3 | 0.2 | 270.0 | 1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_191288.1_14136.t1 | gi|56118073|gb|AAV73912.1| | calmodulin-like protein [Pinctada fucata] | 7.0e-29 |
Transcript
| Transcript ID | pfu_aug1.0_191288.1_14136.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_191288.1_14136.t1 atgagatctctaggtcaaaaccccaatgaacaagaattacaagatctcgtggaagaaatcgacacagacggcaatggaga ggttgatttcaacgagttcttggccatgatggctaagaaaatgaaagacaccgactcggaagaggaaattcgggaagcct tcagagtgttcgatagggatgacaaaggtttt |
|
Protein
| Protein ID | pfu_aug1.0_191288.1_14136.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_191288.1_14136.t1 MRSLGQNPNEQELQDLVEEIDTDGNGEVDFNEFLAMMAKKMKDTDSEEEIREAFRVFDRDDKGF |
|