Gene
| Gene Model ID | pfu_aug1.0_19138.1_03974 |
|---|---|
| Locus | scaffold19138.1 : 3726 ... 13672 : + |
| To GenomeBrowser | scaffold19138.1:3726..13672 |
| Genes list of scaffold | scaffold19138.1 |
| Synonym | NA |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | STAT-like |
| Description | NCBI blastp top hit to Biomphalaria glabrata signal transducer and activator of transcription 2 [ACZ25562.1] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19138.1_03974.t1 | 1 | 1 | STAT_bind | 47 | 230 | 4.10006e-41 | 141.2 | 1.4013e-44 | 2.0e-40 | 138.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_19138.1_03974.t1 | gi|269101270|gb|ACZ25562.1| | signal transducer and activator of transcription 2 [Biomphalaria glabrata] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_19138.1_03974.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19138.1_03974.t1 atgactgattatgatgtcatcaaattctatggaaatggtcctaaaactctgggaaatgactttatgaaatcgacgttaca ataccattttcatgacgtcacaatggtttttacttcagggcttgttcttttcagtacatttattgtggagagccagcccc ctcaagtattaaagaaggaatccagattttctgctcgagtcagacttttggtgggaggtaaactcaacatctatatgact ccgccacaagtcagagcatcaatcattagacaatttgaagaaaaagctgaccataccttaatctttcttatcagtgaagt gcaggccagaaatttattgaagaatgactcctcggcaaagaaagatacctgtggtgacatagccaataatatgggtatga tggagtacaaccaacagaaaggggagctcagtattgaattcagaaacatgcaacttcgccgtatacgtcgtgcagacaag cgaggagcagaggcagtgacggaagaaaagttctgtattctgttccagtcagacttccaaatcggtaacggtgaactgat gttccaagtatggacgctatctctgccggttgttgtaacggtgcatggtaaccaggaatgcaatgccttggccacggttc tgtgggacaaccaattcaatgaaccggtttgtttattaagatttttttgtttttcatga |
|
Protein
| Protein ID | pfu_aug1.0_19138.1_03974.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19138.1_03974.t1 MTDYDVIKFYGNGPKTLGNDFMKSTLQYHFHDVTMVFTSGLVLFSTFIVESQPPQVLKKESRFSARVRLLVGGKLNIYMT PPQVRASIIRQFEEKADHTLIFLISEVQARNLLKNDSSAKKDTCGDIANNMGMMEYNQQKGELSIEFRNMQLRRIRRADK RGAEAVTEEKFCILFQSDFQIGNGELMFQVWTLSLPVVVTVHGNQECNALATVLWDNQFNEPVCLLRFFCFS |
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