Gene
| Gene Model ID | pfu_aug1.0_1917.1_44187 |
|---|---|
| Locus | scaffold1917.1 : 111056 ... 115829 : + |
| To GenomeBrowser | scaffold1917.1:111056..115829 |
| Genes list of scaffold | scaffold1917.1 |
| Synonym | pfu_aug2.0_3253.1_12411 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1917.1_44187.t1 | 1 | 1 | Neur_chan_LBD | 14 | 218 | 0.0 | 187.0 | 0.0 | 0.0 | 186.6 |
| pfu_aug1.0_1917.1_44187.t1 | 1 | 1 | Neur_chan_memb | 228 | 332 | 5.7e-18 | 65.6 | 1.0e-21 | 7.6e-18 | 65.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1917.1_44187.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1917.1_44187.t1 atgactgtaacattatctacacaaaatagagcacttggtttatataaacgattgtttcataacgagtaccatgcagccat catcccgctatgctctgacgttgataaagtgaaagtacgagttgatatggctttgagagagttagtcgaactccacgaaa aacatcaattgattaggcttaaaatctggatgagattgaaatggaatgactgtaccttaagatggaattccacagagttc aatggaatcgagtccataacaataccatatggaaatgtatggatcccggatataacgctgtacgaaggatctagtgacga ggcgaatatgccagggaaagacgaatattacgcaagagttgactcggatggaaccgtaacctacaacttcccgtcaatca tcacggcttcttgtcaaatagacgtcaccttcttcccgtatgatcgtcagaactgcagcttaacatttggttcttggatt catgatggaaatctaatcgaccttgaacttgtgaatccatatgcagacactgaaaaattcgttcatcataacgaatggaa cttggagtttgttccagcatttaaacatgtgctttattacaactgttgcccagagccgtatcccgacgtcacctattacg tcagtctgtcacgtttcccgaagttttatctgttgacagtttttgtaccgtgtgttataatttcgatcctttccattttg ggttttgttctgcccccggtatccggagacaaaatatcgttacagatcacggttttattatccatcgtagtgtttctctt gctagtacaagacaagctgccgtcttcctccgacacgttcccgcacctcggtgtatttttcatgacggcgatgtgcttga caagtttgtcatgtgttatgtctggaattatcatgtacatctattatagggatattactggtagaaaaattccggtttgc atccgagtgcttttttctcaaatatatgagaagaattttgtgcgtaaaactcaaacctggaagcggttctatgtacgaga tggaaaatga |
|
Protein
| Protein ID | pfu_aug1.0_1917.1_44187.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1917.1_44187.t1 MTVTLSTQNRALGLYKRLFHNEYHAAIIPLCSDVDKVKVRVDMALRELVELHEKHQLIRLKIWMRLKWNDCTLRWNSTEF NGIESITIPYGNVWIPDITLYEGSSDEANMPGKDEYYARVDSDGTVTYNFPSIITASCQIDVTFFPYDRQNCSLTFGSWI HDGNLIDLELVNPYADTEKFVHHNEWNLEFVPAFKHVLYYNCCPEPYPDVTYYVSLSRFPKFYLLTVFVPCVIISILSIL GFVLPPVSGDKISLQITVLLSIVVFLLLVQDKLPSSSDTFPHLGVFFMTAMCLTSLSCVMSGIIMYIYYRDITGRKIPVC IRVLFSQIYEKNFVRKTQTWKRFYVRDGK |
|