Gene
Gene Model ID | pfu_aug1.0_1917.1_44187 |
---|---|
Locus | scaffold1917.1 : 111056 ... 115829 : + |
To GenomeBrowser | scaffold1917.1:111056..115829 |
Genes list of scaffold | scaffold1917.1 |
Synonym | pfu_aug2.0_3253.1_12411 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1917.1_44187.t1 | 1 | 1 | Neur_chan_LBD | 14 | 218 | 0.0 | 187.0 | 0.0 | 0.0 | 186.6 |
pfu_aug1.0_1917.1_44187.t1 | 1 | 1 | Neur_chan_memb | 228 | 332 | 5.7e-18 | 65.6 | 1.0e-21 | 7.6e-18 | 65.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_1917.1_44187.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1917.1_44187.t1 atgactgtaacattatctacacaaaatagagcacttggtttatataaacgattgtttcataacgagtaccatgcagccat catcccgctatgctctgacgttgataaagtgaaagtacgagttgatatggctttgagagagttagtcgaactccacgaaa aacatcaattgattaggcttaaaatctggatgagattgaaatggaatgactgtaccttaagatggaattccacagagttc aatggaatcgagtccataacaataccatatggaaatgtatggatcccggatataacgctgtacgaaggatctagtgacga ggcgaatatgccagggaaagacgaatattacgcaagagttgactcggatggaaccgtaacctacaacttcccgtcaatca tcacggcttcttgtcaaatagacgtcaccttcttcccgtatgatcgtcagaactgcagcttaacatttggttcttggatt catgatggaaatctaatcgaccttgaacttgtgaatccatatgcagacactgaaaaattcgttcatcataacgaatggaa cttggagtttgttccagcatttaaacatgtgctttattacaactgttgcccagagccgtatcccgacgtcacctattacg tcagtctgtcacgtttcccgaagttttatctgttgacagtttttgtaccgtgtgttataatttcgatcctttccattttg ggttttgttctgcccccggtatccggagacaaaatatcgttacagatcacggttttattatccatcgtagtgtttctctt gctagtacaagacaagctgccgtcttcctccgacacgttcccgcacctcggtgtatttttcatgacggcgatgtgcttga caagtttgtcatgtgttatgtctggaattatcatgtacatctattatagggatattactggtagaaaaattccggtttgc atccgagtgcttttttctcaaatatatgagaagaattttgtgcgtaaaactcaaacctggaagcggttctatgtacgaga tggaaaatga |
Protein
Protein ID | pfu_aug1.0_1917.1_44187.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1917.1_44187.t1 MTVTLSTQNRALGLYKRLFHNEYHAAIIPLCSDVDKVKVRVDMALRELVELHEKHQLIRLKIWMRLKWNDCTLRWNSTEF NGIESITIPYGNVWIPDITLYEGSSDEANMPGKDEYYARVDSDGTVTYNFPSIITASCQIDVTFFPYDRQNCSLTFGSWI HDGNLIDLELVNPYADTEKFVHHNEWNLEFVPAFKHVLYYNCCPEPYPDVTYYVSLSRFPKFYLLTVFVPCVIISILSIL GFVLPPVSGDKISLQITVLLSIVVFLLLVQDKLPSSSDTFPHLGVFFMTAMCLTSLSCVMSGIIMYIYYRDITGRKIPVC IRVLFSQIYEKNFVRKTQTWKRFYVRDGK |