Gene
| Gene Model ID | pfu_aug1.0_192.1_22050 |
|---|---|
| Locus | scaffold192.1 : 68976 ... 88763 : + |
| To GenomeBrowser | scaffold192.1:68976..88763 |
| Genes list of scaffold | scaffold192.1 |
| Synonym | pfu_aug2.0_1281.1_04940 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_192.1_22050.t1 | 6 | 1 | PKD | 145 | 200 | 2.1e-13 | 49.8 | 6.1e-09 | 2.3e-05 | 24.0 |
| pfu_aug1.0_192.1_22050.t1 | 3 | 1 | REJ | 191 | 217 | 1.2e-13 | 50.2 | 0.23 | 860.0 | -2.1 |
| pfu_aug1.0_192.1_22050.t1 | 6 | 2 | PKD | 275 | 302 | 2.1e-13 | 49.8 | 0.093 | 350.0 | 1.0 |
| pfu_aug1.0_192.1_22050.t1 | 6 | 3 | PKD | 420 | 475 | 2.1e-13 | 49.8 | 0.046 | 170.0 | 2.0 |
| pfu_aug1.0_192.1_22050.t1 | 3 | 2 | REJ | 538 | 568 | 1.2e-13 | 50.2 | 0.5 | 1900.0 | -3.2 |
| pfu_aug1.0_192.1_22050.t1 | 6 | 4 | PKD | 549 | 573 | 2.1e-13 | 49.8 | 9.8e-05 | 0.36 | 10.5 |
| pfu_aug1.0_192.1_22050.t1 | 2 | 1 | PLAT | 558 | 580 | 3.2e-09 | 37.1 | 0.33 | 1200.0 | -0.2 |
| pfu_aug1.0_192.1_22050.t1 | 6 | 5 | PKD | 603 | 623 | 2.1e-13 | 49.8 | 0.0052 | 19.0 | 5.0 |
| pfu_aug1.0_192.1_22050.t1 | 6 | 6 | PKD | 729 | 747 | 2.1e-13 | 49.8 | 0.00058 | 2.2 | 8.1 |
| pfu_aug1.0_192.1_22050.t1 | 3 | 3 | REJ | 803 | 1028 | 1.2e-13 | 50.2 | 4.9e-17 | 1.8e-13 | 49.6 |
| pfu_aug1.0_192.1_22050.t1 | 2 | 2 | PLAT | 1646 | 1717 | 3.2e-09 | 37.1 | 9.0e-12 | 3.3e-08 | 33.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_192.1_22050.t1 | gi|260836529|ref|XP_002613258.1| | hypothetical protein BRAFLDRAFT_68223 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_192.1_22050.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_192.1_22050.t1 atgtatgattcattcacagatgttgtcatcggtttagacgatttgggaaatccaataactgacgaagatttgttcagcct cagagatatcactttctacgacagacctgtgatagaattgaatcaagatccctctggttatgatggacttctaggatgca tttcatcccccgatgcattttccaccagttcttctataagtcttgccgatgacctccctcagacatgtcgtattcattgc aaaactgtgaatcaacagtatgctgtattaagtcataacatgttatgtagctgctcccatacaatggatgaatcatccgt gtctgatgatggtttgtgtgatagttctttcagagtctacagaacgtccttggtatcagacgaaggctccttcaggttga gcatagtggttatcagattgcagacgagaccatatgtaaaagcgaatgaaactgtgaagttgagtatagacacggatatc ataagtcagacggaatacactttggcatttggagatggggcaacaactattacatcggaaagaaacctgttttattcttg ggatcaagccggtacatacacgattagtgttactgtcactttaggtcaattcagggtatctaaccaaaccgtatttacag tggaagatgttgatgagagtgtgaaaccggaattggtagtcatctctagccaccacatgaagacacaaatgtcaggtcag gtacatttcacggtatttgatgaagaagatacaacatgtgacatagatattaatgatggctcgccacagagacaattcaa ttcactgaggagctatattgaacagaagcaattcgatcatgattatccaacatttggaagatatgcattgaaatcaactt gtcaaaacagaattggatcaactcagaatgaaacttatttcttatcgaagaaatttgaaattccattcgagtatcacaat ttagaggagactttaccaattgatgttgcaggaggaaagtctttcattgaacagctaaaaataaaacgcgtctctcattc aggttactctgagcaggttgttcagcacactgaatccggcataattatcaactcttctacgattcacccctttgaaaatc tgttcatagtagaagctaatgatgaggtacttttgagacgaagaattcatgctcaaggattatttcagaaagcatcagta gttccttcagtaagaaatcaggcacgccagttgatatcaaatttatctgtccaagtaccaccgggaaataacttgtttgt gaatgtatcgtttggcagagattctccccgtttgctatatgtatacgaggcaaatcaaacacagtcaattgattttgagg ttgactttccagacctaggctactatccaatacaggtcatggcgtctaacgatcttatgacgaactctgctaacgacttg atttctgtagaggttcccattatatcaatatcgcttgtgacacacaatatcacggacaaaactcaacctgtgattctata tatcgatctcaacatgggagaggaaggtcctgataaagtaagcttcataatagacagagatgatggacactctgacttca ttgattacagaagcttttcacacaatttcactacatttcaaaatagctatatctacagtgactgggggatatataccata cgtgttactgcaaaaaacacagtaagtagagtaacggcatacattttggttcaagttggacagaacctcacccatgtaga cttacaaacatcctcaatgtcacgttttacgacagatgattatgctgaatttaatataacaattgataccggaaccgatg tcacatacagtgtagaattcggggatggagacaggtttatttttactgacattgaattagctcttggtactgtccacgca aattcgtcgttagataatgacattgcaaatcacagcgaaataacaacattatcagggaacgagctacatgatgatcatac tattgagcctcaatttgagtccttaacttcaaccattgcttctattgtaatgaatgcacttacaagtacagacagcaatg tgaaatcaactactcaaacattccaaaacagggagaaacgtagcattgattacagaccagggtcgtttgccactagactg tcagaggacgtgatcaaaattcgccatttgtacaaaagaccaggtgcatatcgagtcagtgtaaatgttcataacgcatt tacttctcgttatgcaactctttgctcatcctttctagtcgatgacacggatgcaagttcatgtgttgaaccagatgtcc agcttttgaatcgtgatacctcgtttaatgacccgtatgttaatattcgctctagggagataaatattacaataaatgct aactctaactgtggagtaggcaatgattatctgcactcatggaaagctgtcaaatattttggaacgcgggaaagaccaat agatgaaatatgcgaggatgaaagtgaatcaaatgttttcgtgttaccagcgttgcttttatggtacggaaaatatagga tagacgtcacggttgctgcctccgggtatcgcttgaggtccacaaagaagtcattctttttggagattgtcccctcatat ccttatgctatcatcagcggagaagaagaagtgtcgtttctcgtgtacggtagcgtgtcattcaacttacgttactcaag ggatccagaccttatacaaaacgagaaagagggaattagatatgatttattttgttctcaaagagatgaattctcatcaa tcgtgagtgataacttacagactgtgatacaaaagtcccgtcaattattcaatggttcgattgcacaggacaagcaagtc acacctctgaagttatacgaatttggtgaatgtttccaaaataatggtaatttttctagtgatataatacttggaaatgg aattctgtccttcccagcagagtcattaacagattcagtagcagattttactttcaagttattcgtgacgaaaaatggac gatcaaatagtacagtccagcatatcaaaatcaaactgacaaattcgtcgagtgcagacgatatgttgaacgctctagac aatattcaggatgcagcagggatgttgagggctatctcagccattaagggcgatatattgggcggaggagctaaggaaaa aatgctgggttcccttgatcgtgtctcagatacagcaaatgacattggtatagtaaacaaccttaacgtgatcgttacag acctgacgtctgatccaacccaaaacagcccagcctcaagaacttccagtgttagcgttgttgaaaaaagcgtaaccata atgacagataaatttgccaaggaacgtcttcatactgtaaaagatgtgtcaaccaatgctttaaagggtataagtaattc cctcccaaaagaggacacggaaaccgcagagagcgcccggcgacggaacaaacgcaccatcatcgagaatccacttccag gagtaggagtggaaccggaaatggatttatatgacagaattctggaggaagaagatctttatcataataaattcattgat gaattctatgaatatgtattcgtgtttccgaaggcattcagagacgctgtacggaagtacaacactctgatgtggctacc gatggacgttttaaaatggccgaaggaggacgttttcagaaaatattctgttgaatgggaaccctttgatattgacgaat acattaattactactgtaaaatagagaaggcaagattggatcaggaaagacttaatgcggataggaacgtagctgaagcc tcaggaggtgcgatcggaagtatgggaaatctcatgttaggtaaaatggaaaaggctcggaggcgcagaaaaaggagagc cttgattggtaacggaaccgaggcagaagctgctgctgatgaggacgttgaggatgttgaccaggcactgcagttaaagg ccgataatttagaacttcaactcgaaaacatcgaccctgactccacagaaagtgatcctaacggtatggcaccacctgca gaatttgttctgtgcgtaagaaggggggatacaattacagatgccactaactggaattatcactcggtgacactggatgc caacgacacaaccatacacttcctgttgtttcctgagagacccgaagacagactcatggtttatatgaagtacgagggat atcctaacgccacctactatgactacaagacaacaattccacacgagatagaggattttcctccaccactaccaaatgat cctaatatatttgaaaacatgcgccatgcattcttccctccacaggaactgacagctctcaatggtacctacaaaattgg agtcggactttcaaagaccgaggttgattttgattcatcaacaacttgccttaattacacgacccaaactcttattacga gttgtaaaatattgaatcctgaaacggaaaaatttgaaaacagaggatgtcttactggcaatgaccttgatattactcag gtggcaaatacgacgacaaaatggcgaacacaatgtatctgttatcctgagccaccggaaccggaaacaacaacaactac aatggctccgacaacagaggaacaacctttcataagaaacagtaaaaagagtagagtggcatctaagacgtctttcggtg gcgacttcgtggcaccaccaaatactattgactttgccaatgtatgggccaagtttaagaaccttagcgagaatgccgct gtattttctactgtcatagtcctgattggactctacgtcattttactgatatggtcaaggcatgaggataaaaaagatct cctaaagtggggagcaactcctctggaggacaatttacccagcgacaactatcactatcaaatcacagtaaatacaggat ctaagaaaaaagcaggaaccaaatccaaagtgagctttattttatctggggagcactgtgacactggtgtcagacgtatg tacgatggacataagcaggagttcgggaaaggaagcattctgaatttcatactgagtgtggagaatgccctaggaccgct aacattcatgcgtatatggcacgacaatagcgttaacttcattttgatgacattcttccgaaaatgtcgaccaaagaaaa acacaataatgcagacgaatcagcatatgccgaaacgtgggaaatggaaaacaattaatggctcccagatcttcggaaga tctgcaaaaagaggattatggaaaaggtttaaagattctgtatctgatatcattaatttccgacaaagacagaaatatgc aaatgagatagatcctcaggaggacgatacccctgtacctgtgatatcgggagttcccgtggacgaaaaatttatgaaaa agaaaaagaagaagaagtcctcgttgccacattggtgtgtttacatagcctggggactttcatggcttagcataataacg gctggattctttacaattctgtacagcatgcagtggggaaaagaaaaggctaacgaatggttgatgaccttccttatgtc cttctttcagtccgtcattgttgtacaacccatcaaggtcatatgcattgttgctttcatcgcctgcattttgaagaaac ctgaaattgatgaagaggatacaaatgaagatcttaacaatgttattgccgcccatgatgaagaattcctgaacaaggac tcacgcactattgatggtacagaagtccataccgtcaaaactatttattttcatttcgttttattttga |
|
Protein
| Protein ID | pfu_aug1.0_192.1_22050.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_192.1_22050.t1 MYDSFTDVVIGLDDLGNPITDEDLFSLRDITFYDRPVIELNQDPSGYDGLLGCISSPDAFSTSSSISLADDLPQTCRIHC KTVNQQYAVLSHNMLCSCSHTMDESSVSDDGLCDSSFRVYRTSLVSDEGSFRLSIVVIRLQTRPYVKANETVKLSIDTDI ISQTEYTLAFGDGATTITSERNLFYSWDQAGTYTISVTVTLGQFRVSNQTVFTVEDVDESVKPELVVISSHHMKTQMSGQ VHFTVFDEEDTTCDIDINDGSPQRQFNSLRSYIEQKQFDHDYPTFGRYALKSTCQNRIGSTQNETYFLSKKFEIPFEYHN LEETLPIDVAGGKSFIEQLKIKRVSHSGYSEQVVQHTESGIIINSSTIHPFENLFIVEANDEVLLRRRIHAQGLFQKASV VPSVRNQARQLISNLSVQVPPGNNLFVNVSFGRDSPRLLYVYEANQTQSIDFEVDFPDLGYYPIQVMASNDLMTNSANDL ISVEVPIISISLVTHNITDKTQPVILYIDLNMGEEGPDKVSFIIDRDDGHSDFIDYRSFSHNFTTFQNSYIYSDWGIYTI RVTAKNTVSRVTAYILVQVGQNLTHVDLQTSSMSRFTTDDYAEFNITIDTGTDVTYSVEFGDGDRFIFTDIELALGTVHA NSSLDNDIANHSEITTLSGNELHDDHTIEPQFESLTSTIASIVMNALTSTDSNVKSTTQTFQNREKRSIDYRPGSFATRL SEDVIKIRHLYKRPGAYRVSVNVHNAFTSRYATLCSSFLVDDTDASSCVEPDVQLLNRDTSFNDPYVNIRSREINITINA NSNCGVGNDYLHSWKAVKYFGTRERPIDEICEDESESNVFVLPALLLWYGKYRIDVTVAASGYRLRSTKKSFFLEIVPSY PYAIISGEEEVSFLVYGSVSFNLRYSRDPDLIQNEKEGIRYDLFCSQRDEFSSIVSDNLQTVIQKSRQLFNGSIAQDKQV TPLKLYEFGECFQNNGNFSSDIILGNGILSFPAESLTDSVADFTFKLFVTKNGRSNSTVQHIKIKLTNSSSADDMLNALD NIQDAAGMLRAISAIKGDILGGGAKEKMLGSLDRVSDTANDIGIVNNLNVIVTDLTSDPTQNSPASRTSSVSVVEKSVTI MTDKFAKERLHTVKDVSTNALKGISNSLPKEDTETAESARRRNKRTIIENPLPGVGVEPEMDLYDRILEEEDLYHNKFID EFYEYVFVFPKAFRDAVRKYNTLMWLPMDVLKWPKEDVFRKYSVEWEPFDIDEYINYYCKIEKARLDQERLNADRNVAEA SGGAIGSMGNLMLGKMEKARRRRKRRALIGNGTEAEAAADEDVEDVDQALQLKADNLELQLENIDPDSTESDPNGMAPPA EFVLCVRRGDTITDATNWNYHSVTLDANDTTIHFLLFPERPEDRLMVYMKYEGYPNATYYDYKTTIPHEIEDFPPPLPND PNIFENMRHAFFPPQELTALNGTYKIGVGLSKTEVDFDSSTTCLNYTTQTLITSCKILNPETEKFENRGCLTGNDLDITQ VANTTTKWRTQCICYPEPPEPETTTTTMAPTTEEQPFIRNSKKSRVASKTSFGGDFVAPPNTIDFANVWAKFKNLSENAA VFSTVIVLIGLYVILLIWSRHEDKKDLLKWGATPLEDNLPSDNYHYQITVNTGSKKKAGTKSKVSFILSGEHCDTGVRRM YDGHKQEFGKGSILNFILSVENALGPLTFMRIWHDNSVNFILMTFFRKCRPKKNTIMQTNQHMPKRGKWKTINGSQIFGR SAKRGLWKRFKDSVSDIINFRQRQKYANEIDPQEDDTPVPVISGVPVDEKFMKKKKKKKSSLPHWCVYIAWGLSWLSIIT AGFFTILYSMQWGKEKANEWLMTFLMSFFQSVIVVQPIKVICIVAFIACILKKPEIDEEDTNEDLNNVIAAHDEEFLNKD SRTIDGTEVHTVKTIYFHFVLF |
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