Gene
| Gene Model ID | pfu_aug1.0_192.1_22053 |
|---|---|
| Locus | scaffold192.1 : 101788 ... 108145 : - |
| To GenomeBrowser | scaffold192.1:101788..108145 |
| Genes list of scaffold | scaffold192.1 |
| Synonym | pfu_aug2.0_1825.1_18555 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_192.1_22053.t1 | 1 | 1 | PKD_channel | 12 | 386 | 0.0 | 291.9 | 0.0 | 0.0 | 291.6 |
| pfu_aug1.0_192.1_22053.t1 | 1 | 1 | Ion_trans | 180 | 378 | 6.6e-09 | 35.2 | 3.7e-12 | 1.4e-08 | 34.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_192.1_22053.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_192.1_22053.t1 atgccatttcgtatactgaaaaagttttatcctgataaagactcttgccaagctattccattaatgcatgcatttgtcag tcaatgtagcagagagtggtctgtccgttttgaggacgataccaagtatagaaccggatggatgtctctaaggtccaatg agacagtagataatctaatgaactacccatggaaacataagtccttattcgacaatgccggtgtcccttatgttggtgaa tttggtgtgtaccctggtggtggatatgttgttgatttgattggcaaaaaagacagagttgtcgaaacattagatgagtt gttagaatttgaatggatcaacaagtactctagagtacttttcatagagttcacagtatataatccccaggctaatatgt tttcaacaatacttattgtatttgaaatgccaaccataggacagttacacatcaattactccattaaaacttttcggctt ttctcatacctcggaggatatggcatattcgttattctaagtgagattgcagctttggcttgtgttgtttatttcatagt gagagaagtcaaaatcttcaaaaggacccgtaccacctatcttaagagtttctggaacattgcagaactagtgaatttgt tattagcgattacagctattgtcatgtacatactacgccacattctaacacagcatgctgttaaaaaggtgacaaaattg agagataaattttacgatttccaaaaagtagcactctgggatgaaacgttcaactttatcctggcatttaccatattcat cgcaatcttaaagcttgtccatattttgcgttttaatcgaaaaatgtcaatgatggccggaattttacgaaatgcagcca aagaactgtcggcatttgttattgtcttcgtccttttcatcttagcctatgcggcatggggctacataatgtttggtcca aaaatggcttcctatcgtagtatgattgacgcaatagagactttgctcaacttttctcttggaagtttcgactatcttgc tttggagaatgcaaacagaattttcggtcctatatttttctttgcattcttttttactataatgttcatccttttgaata tctttgttactattttgaatgaatcgatttctactgtaaaagatgatgtctcaaagcaaaccaacgagtacgaacttgtc gccttcatatggcaaaagcttaaagactggtctggattagatttagatagaatcgtccaggacgtcaaacggaagtatga tataggacccgtgatagaaaagcctttgtgttttgatgaagcagctgaagatattgagcagaaactcctggatatagcat tgagaattgaagcgcttgatttacctctccagacacatgttaaaaggggcaatcaagcagaagctcggccatccacaaga agatttacgcgaattttccctacacttatcagaggaagctctgactgctaa |
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Protein
| Protein ID | pfu_aug1.0_192.1_22053.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_192.1_22053.t1 MPFRILKKFYPDKDSCQAIPLMHAFVSQCSREWSVRFEDDTKYRTGWMSLRSNETVDNLMNYPWKHKSLFDNAGVPYVGE FGVYPGGGYVVDLIGKKDRVVETLDELLEFEWINKYSRVLFIEFTVYNPQANMFSTILIVFEMPTIGQLHINYSIKTFRL FSYLGGYGIFVILSEIAALACVVYFIVREVKIFKRTRTTYLKSFWNIAELVNLLLAITAIVMYILRHILTQHAVKKVTKL RDKFYDFQKVALWDETFNFILAFTIFIAILKLVHILRFNRKMSMMAGILRNAAKELSAFVIVFVLFILAYAAWGYIMFGP KMASYRSMIDAIETLLNFSLGSFDYLALENANRIFGPIFFFAFFFTIMFILLNIFVTILNESISTVKDDVSKQTNEYELV AFIWQKLKDWSGLDLDRIVQDVKRKYDIGPVIEKPLCFDEAAEDIEQKLLDIALRIEALDLPLQTHVKRGNQAEARPSTR RFTRIFPTLIRGSSDC |
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