Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_19240.1_54559
Locus scaffold19240.1 : 1 ... 967 : +
To GenomeBrowser scaffold19240.1:1..967
Genes list of scaffold scaffold19240.1
Synonym pfu_aug2.0_663.1_11048

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_19240.1_54559.t1 gi|344245534|gb|EGW01638.1| Dynein light chain 1, axonemal, partial [Cricetulus griseus] 2.0e-11

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
8-16cell 1
egg-Dshape 1
trochophore 1
>Adult tissues
Dshape 1
mantle 1
mantleEdge 1
mantlePallium 1
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_19240.1_54559.t1
Definition-
>pfu_aug1.0_19240.1_54559.t1
gctgatttacctctactagaggagttgctgtttgttgggaatcccctagaagaaaaggaatcagcagatggtacctacag
agataatgttgccaagaaactacctaagctcaaaaaactagatggtgttcctgttatcagagatggggatgatgatgagg
aaggtgattag

Protein
Protein IDpfu_aug1.0_19240.1_54559.t1
Definition-
>pfu_aug1.0_19240.1_54559.t1
ADLPLLEELLFVGNPLEEKESADGTYRDNVAKKLPKLKKLDGVPVIRDGDDDEEGD

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