Gene
| Gene Model ID | pfu_aug1.0_19245.1_54562 |
|---|---|
| Locus | scaffold19245.1 : 2237 ... 10557 : - |
| To GenomeBrowser | scaffold19245.1:2237..10557 |
| Genes list of scaffold | scaffold19245.1 |
| Synonym | pfu_aug2.0_197.1_23651 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19245.1_54562.t1 | 1 | 1 | GMP_PDE_delta | 3 | 127 | 0.0 | 203.6 | 0.0 | 0.0 | 203.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_19245.1_54562.t1 | gi|321459099|gb|EFX70156.1| | hypothetical protein DAPPUDRAFT_231640 [Daphnia pulex] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 2 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_19245.1_54562.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19245.1_54562.t1 atgacagcgatgacgaagcagaacaagaagagattgatccacatgcaggcagatttgtacgatatcaattcactccacaa ttccttaaactgaaaactgttggtgcaacggttgaatttgtggtgggagaaaaacctgtgaataaattcagaatgataga aagacatttcttcaaggaaaaattgctgaagagttttgattttgagtttgggttttgtataccccacagcagaaataccg tagaacatatatacgagttccctccacttacaccagacgaagttgatgacatggtacagcatccttttgacacacgatca gacagcttttattttgtggaggacaaactgatcatgcacaacaaagcagattacgcgtataatggtggaacttag |
|
Protein
| Protein ID | pfu_aug1.0_19245.1_54562.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19245.1_54562.t1 DSDDEAEQEEIDPHAGRFVRYQFTPQFLKLKTVGATVEFVVGEKPVNKFRMIERHFFKEKLLKSFDFEFGFCIPHSRNTV EHIYEFPPLTPDEVDDMVQHPFDTRSDSFYFVEDKLIMHNKADYAYNGGT |
|