Gene
| Gene Model ID | pfu_aug1.0_19269.1_03993 |
|---|---|
| Locus | scaffold19269.1 : 15656 ... 27650 : + |
| To GenomeBrowser | scaffold19269.1:15656..27650 |
| Genes list of scaffold | scaffold19269.1 |
| Synonym | pfu_aug2.0_281.1_03930 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19269.1_03993.t1 | 2 | 1 | DEAD | 9 | 59 | 1.7e-11 | 43.8 | 2.9e-14 | 1.4e-10 | 40.8 |
| pfu_aug1.0_19269.1_03993.t1 | 2 | 2 | DEAD | 119 | 167 | 1.7e-11 | 43.8 | 0.071 | 350.0 | 0.5 |
| pfu_aug1.0_19269.1_03993.t1 | 1 | 1 | Helicase_C | 129 | 204 | 1.3e-21 | 76.2 | 5.3e-25 | 2.6e-21 | 75.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_19269.1_03993.t1 | gi|345327882|ref|XP_001510706.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_19269.1_03993.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19269.1_03993.t1 atgcatgggattggacgtgtgaccaacttaagacgctgtacatatatagtattggacgaagcagataggatgtttgatat gggctttgaaccacaggtgacaaagatcatagacagtgtacgtcctgatcgtcagactgtcatgttctcggctaccttcc ccagacagatggaggctctggccaggaagatactgaacaaacctatagaagtccaggtgggaggcaggagtgtggtgtgt aaggacgtcgaacaacatgtgataattatcgatgaagataagaagttcctgaagttgttagagttactaggtatatacca ggagcgaggcagtgttttagtgtttgtagataagcaggaacatgctgatgagttaatgaaggagttactaactcactcct acccgtgtatgtctctacatggaggtatagaccagtatgacagggattctactatagtagacttcaaaaacggaaacgtc aaactactggtagctacatcagtggcagctcgaggtttagacgtacgacatctgatcctggtaattaattataactgtcc aaatcactacgaggactacgtacacagatgtggtcgtactggtagagcgggaaataaaggtttcgcttttaccttcataa caccagaacaggagaggtatgcaggggacataatcaaagctttagaactctcaggaactgaagtaccctcagatttggag aagttgtggaatgactacaaggaaaaagccaaactggagggaagaacagttaaaagttccagcggcttccttggtaaagg atttaagtttgatgagacagaggctcagctggctaacgagaggaagaagcttcagaaggcggcacttggtctacaggact ctgatgatgaggactcggctgtagac |
|
Protein
| Protein ID | pfu_aug1.0_19269.1_03993.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19269.1_03993.t1 MHGIGRVTNLRRCTYIVLDEADRMFDMGFEPQVTKIIDSVRPDRQTVMFSATFPRQMEALARKILNKPIEVQVGGRSVVC KDVEQHVIIIDEDKKFLKLLELLGIYQERGSVLVFVDKQEHADELMKELLTHSYPCMSLHGGIDQYDRDSTIVDFKNGNV KLLVATSVAARGLDVRHLILVINYNCPNHYEDYVHRCGRTGRAGNKGFAFTFITPEQERYAGDIIKALELSGTEVPSDLE KLWNDYKEKAKLEGRTVKSSSGFLGKGFKFDETEAQLANERKKLQKAALGLQDSDDEDSAVD |
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