Gene
| Gene Model ID | pfu_aug1.0_19270.1_54564 |
|---|---|
| Locus | scaffold19270.1 : 1 ... 9995 : + |
| To GenomeBrowser | scaffold19270.1:1..9995 |
| Genes list of scaffold | scaffold19270.1 |
| Synonym | NA |
Manual annotation
| Study field | Metabolism |
|---|---|
| Gene name | RPE65 superfamily |
| Description | Highest blast hit to YP_003115563.1 beta-carotene 15,15'-monooxygenase [Catenulispora acidiphila DSM 44928] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19270.1_54564.t1 | 1 | 1 | RPE65 | 11 | 234 | 8.90007e-41 | 139.9 | 2.24208e-44 | 1.2e-40 | 139.5 |
Transcript
| Transcript ID | pfu_aug1.0_19270.1_54564.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19270.1_54564.t1 acgttgctcaatatgaagtctccctcattcttaaagatagcctggaatttagaaatagcgaaccttcctttatctatgtc attgaaattagtaccggaaaggtaacaacacttaaaagcagtccagggttcgtgctacatcacataaacgctaaagaagt aaacgataatcaaataaatatggatgtctgtttatataatgatgcaaagattttggataactatgatttaagtgttctcg taaataagacaatgcgagatagtctgcaatggcgaccaaaagttacccggatgcaattggatttaaccgagagttctgtg cgaagtgttacatttaacaactctgaaaaggtggcatattcggcagaacttgaatttccttctattaacgaaagatataa atcaaaacactattgtttcgtttatggaatagtgttttcaaaaaataacacaatattttcccagtggaaggtggtcaaga aaaatctatgtaacgatacgagagatttagagtttgatgtccccagcatatacccatcgaaagtgacgtttgtgagcgat ccaaccggaagtaaagaagatgatggttacttattaatggtggccttcaatactgtgaccaattcaagtgaccttgtcat tattgacgccagaactatgctgataaataacactgctgcattacccacttttgtaccattcacgtatagtggagctctgt cgccgtaa |
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Protein
| Protein ID | pfu_aug1.0_19270.1_54564.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19270.1_54564.t1 VAQYEVSLILKDSLEFRNSEPSFIYVIEISTGKVTTLKSSPGFVLHHINAKEVNDNQINMDVCLYNDAKILDNYDLSVLV NKTMRDSLQWRPKVTRMQLDLTESSVRSVTFNNSEKVAYSAELEFPSINERYKSKHYCFVYGIVFSKNNTIFSQWKVVKK NLCNDTRDLEFDVPSIYPSKVTFVSDPTGSKEDDGYLLMVAFNTVTNSSDLVIIDARTMLINNTAALPTFVPFTYSGALS P |
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