Gene
Gene Model ID | pfu_aug1.0_19270.1_54564 |
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Locus | scaffold19270.1 : 1 ... 9995 : + |
To GenomeBrowser | scaffold19270.1:1..9995 |
Genes list of scaffold | scaffold19270.1 |
Synonym | NA |
Manual annotation
Study field | Metabolism |
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Gene name | RPE65 superfamily |
Description | Highest blast hit to YP_003115563.1 beta-carotene 15,15'-monooxygenase [Catenulispora acidiphila DSM 44928] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_19270.1_54564.t1 | 1 | 1 | RPE65 | 11 | 234 | 8.90007e-41 | 139.9 | 2.24208e-44 | 1.2e-40 | 139.5 |
Transcript
Transcript ID | pfu_aug1.0_19270.1_54564.t1 |
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Definition | - |
>pfu_aug1.0_19270.1_54564.t1 acgttgctcaatatgaagtctccctcattcttaaagatagcctggaatttagaaatagcgaaccttcctttatctatgtc attgaaattagtaccggaaaggtaacaacacttaaaagcagtccagggttcgtgctacatcacataaacgctaaagaagt aaacgataatcaaataaatatggatgtctgtttatataatgatgcaaagattttggataactatgatttaagtgttctcg taaataagacaatgcgagatagtctgcaatggcgaccaaaagttacccggatgcaattggatttaaccgagagttctgtg cgaagtgttacatttaacaactctgaaaaggtggcatattcggcagaacttgaatttccttctattaacgaaagatataa atcaaaacactattgtttcgtttatggaatagtgttttcaaaaaataacacaatattttcccagtggaaggtggtcaaga aaaatctatgtaacgatacgagagatttagagtttgatgtccccagcatatacccatcgaaagtgacgtttgtgagcgat ccaaccggaagtaaagaagatgatggttacttattaatggtggccttcaatactgtgaccaattcaagtgaccttgtcat tattgacgccagaactatgctgataaataacactgctgcattacccacttttgtaccattcacgtatagtggagctctgt cgccgtaa |
Protein
Protein ID | pfu_aug1.0_19270.1_54564.t1 |
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Definition | - |
>pfu_aug1.0_19270.1_54564.t1 VAQYEVSLILKDSLEFRNSEPSFIYVIEISTGKVTTLKSSPGFVLHHINAKEVNDNQINMDVCLYNDAKILDNYDLSVLV NKTMRDSLQWRPKVTRMQLDLTESSVRSVTFNNSEKVAYSAELEFPSINERYKSKHYCFVYGIVFSKNNTIFSQWKVVKK NLCNDTRDLEFDVPSIYPSKVTFVSDPTGSKEDDGYLLMVAFNTVTNSSDLVIIDARTMLINNTAALPTFVPFTYSGALS P |