Gene
| Gene Model ID | pfu_aug1.0_1930.1_00896 |
|---|---|
| Locus | scaffold1930.1 : 19896 ... 31194 : + |
| To GenomeBrowser | scaffold1930.1:19896..31194 |
| Genes list of scaffold | scaffold1930.1 |
| Synonym | pfu_aug2.0_381.1_04086 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1930.1_00896.t1 | 1 | 1 | Shal-type | 2 | 29 | 1.0e-14 | 53.7 | 5.4e-18 | 1.6e-14 | 53.0 |
| pfu_aug1.0_1930.1_00896.t1 | 1 | 1 | BTB_2 | 42 | 131 | 2.0e-27 | 95.2 | 1.7e-30 | 5.1e-27 | 93.9 |
| pfu_aug1.0_1930.1_00896.t1 | 2 | 1 | Ion_trans | 182 | 199 | 7.2e-23 | 80.8 | 0.66 | 2000.0 | -2.2 |
| pfu_aug1.0_1930.1_00896.t1 | 2 | 2 | Ion_trans | 228 | 375 | 7.2e-23 | 80.8 | 2.4e-26 | 7.2e-23 | 80.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1930.1_00896.t1 | gi|14190049|gb|AAK55540.1|AF375600_1 | potassium channel protein Shal 1.d [Panulirus interruptus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1930.1_00896.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1930.1_00896.t1 atggcatccgttgcagcctggcttccgtttgcgcgggcctcggccataggctgggttccggttgcacaaaacccacttcc gcaacccgtgttccgggcggaaaacaggaggggtgatgagaaagtgaccattaatgtaagcggtcggaaattcgaaacat ggcgaacaacgctcgaaaaatacccagataccctactaggatcaaatgaaaaggaatttttctacgacgacgatggaaaa gattatttctttgaccgtgatcccgagttgttcagacatatattaaattattataggactggaaaagtacactacccgaa acttgaatgtttggccgcgtacgatgaggaactcgcttttttcggaattcttcctgatttaatcggggattgttgttatg aagattacagggacagaaagagagaaaaccaagaacggttaatagatgacaaagattcggaaaatgaacatatggactct gcgaaaaccctcagggagcgaatgtggagggcttttgaaaatcctcatataggcacgacggctttagtattttactatgt aaccggcttctttatcgctgtatctgttatggcaaacgtagtagaaactatagaatgtggcacaatacctggaacgaacg aagttcaaagctgcgctgataagtatactctacattttttctgcttagacactgcttgcgtcattatattcaccgccgaa tacctgcttcgtctgtacgcggcccccgatcgttgtaaattcatgcgcagcattatgagcattatcgatgttgtggctat acttccgtactatataagtctggtgatttctgacaacgatgacgtcagcggagctttcgtcacgctgagggtattccgag tgtttaggatctttaaattttcgcggcattcacaaggattacgaattttaggttacactttgaaaagttgtgcaagcgag cttggatttttagtcttctctctaaccatggcggtgattatatttgccaccgttatttattatgcagagaaaaaggaaat tggctccaaatttacaagtatcccaatggcatcctggtatacaattgttaccatgacaaccctgggatatctaaatctac tggtaccgtacagacatgcctttggatccgaaccttccaacaaaagtccttga |
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Protein
| Protein ID | pfu_aug1.0_1930.1_00896.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1930.1_00896.t1 MASVAAWLPFARASAIGWVPVAQNPLPQPVFRAENRRGDEKVTINVSGRKFETWRTTLEKYPDTLLGSNEKEFFYDDDGK DYFFDRDPELFRHILNYYRTGKVHYPKLECLAAYDEELAFFGILPDLIGDCCYEDYRDRKRENQERLIDDKDSENEHMDS AKTLRERMWRAFENPHIGTTALVFYYVTGFFIAVSVMANVVETIECGTIPGTNEVQSCADKYTLHFFCLDTACVIIFTAE YLLRLYAAPDRCKFMRSIMSIIDVVAILPYYISLVISDNDDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASE LGFLVFSLTMAVIIFATVIYYAEKKEIGSKFTSIPMASWYTIVTMTTLGYLNLLVPYRHAFGSEPSNKSP |
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