Gene
| Gene Model ID | pfu_aug1.0_1938.1_00903 |
|---|---|
| Locus | scaffold1938.1 : 1 ... 22475 : - |
| To GenomeBrowser | scaffold1938.1:1..22475 |
| Genes list of scaffold | scaffold1938.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1938.1_00903.t1 | 2 | 1 | DUF4590 | 184 | 261 | 1.8e-27 | 95.4 | 1.2e-31 | 1.8e-27 | 95.4 |
| pfu_aug1.0_1938.1_00903.t1 | 2 | 2 | DUF4590 | 296 | 319 | 1.8e-27 | 95.4 | 0.4 | 6000.0 | -3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1938.1_00903.t1 | gi|124481637|gb|AAI33136.1| | Zgc:158613 protein [Danio rerio] | 8.0e-31 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1938.1_00903.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1938.1_00903.t1 atggccaggaaagaacacaagaaacatgtaaagaatcttctcgctcaagccatcgtgcacaaatctttagatctggaacg tacccgtcaagttgaaatcagaagaaaactagaggaaattgcgaaaatagaacttgtcagacgagtgagggtgatatacg ttgacgagcacgggagaaggttgtctcccgataggagagatcaggagagaccccagcgcgggagacccgaggagattgac accaaacacctgtactctctggactctacagctttaaagaagtatgccttgcaacttgcacggattgaccaaggagaagt gtcaccatatttactgtcacccgtccccaccccaccacgtagctctcgaggcagtaggagcggtatggtaggacagagac tgagggtgcgacctcgtacagcggaggcaaggagtccttacagggagagaccctcctcaggacaagtacagtcagtctcc ggatcgtcaaagtcctcggaaatatctcccaagagtaccccaaagggtactcctagacggagatttcaacagcaacgatt tgtcgaagtttacacattttcctttatatctcgtcgtcatcgtggatttccgttcagtttaagtatctttgtggatggta ggatagactgcaggatcagtacgtgttgcgaatatcgtcacgctaaaggagttaaacttggagggaagatgggccacttc tccctccttaaagttaaaggtgctactccttgctacaaatgtaaattgaattcacaagctagtccaagaagtttgaagcg acctccgacctttaaaaaggacaaaggtcaaccagaacaaatgcaggaagaggtcattgttgtagataagagatctgtga ctgtcacacaggacgaagctaaaagaagcaaacagagagttgctaagagagatatagtagtgtctacgactaaagccgat gacagcgaagaaataaaaggaggtaattttgaagacgacttatctgcggaagcaagtaagactactggaaatagttcaca agatggcgtggaagaaggctctcccctaagaactagcactccgctatccaaagactgcactcctgttgtagactgggatg aagagaatgatgaacctgtagtgaagagaagggaatctgatacaaccaatcgtgcggggaaacaagtcaggtttgacgtg aaggttcagaaaatgggaacgccggaaacctcagagagtaataggaatggggacaatgatgatactgtggggaaggtaga acccctgtataaggactccgatgataaactgatgaaggagctgaaagaactcttagatgaagatgatgggcttgacactt gtgatgaggtgtccgagctggagacagacttagactctccgagaaaagatggtgaaggaaggagcagaaaaacggagaaa gcaaaacagaagaagggaagcaagaatgtagtggatggctctggaagtgatttgagtgtcaagaatgtggaaaaagaact tgatgatccaaaagacagtgataaaagttcaagctctgactcgaagagaacaaaaggtcagatcaacaaccataaagaag atgactcatgtgaaagccagatgaatgcagattctcacgaccacaaaaatgtgaatgaagccattattcatgcaggagaa acaacggctagtgttgcacatgttggcattgaaaaactatctgtgaagaaagaagatggtgaaaaggaaagtcaaacaca gtcgcatgatcacacgaccatggcagaatctattatacacgcaggggaaacttccgctgctattacacatgttgatattg agaacttatctcaccaaaaggagggtgtatctatcaacacatttgaagggtcacgtggagaagaggttgagagtaaagct ggtgtcatcaagacattaactgaatcacacaatcagactgataagattgcacttttagctaagacaggcgatggagaaac agatcaagctaaaaggtcagaagagacagggactggctgttctttcaatgacgatcgaataattccagaaaaagtaccat ctttgaaagcagattttgactctaaggaaatatcagaacaggagcagttggatgatctgagttcagacggaagtagaaaa aatctagacatagctccactaccaactgaaggtgaagtcattcctagccccatcattgactctccaaatgaaatacaatc attaactcctgctggtcaaaatttagataaaaagcttcctacaaagtcagacattttggcgaaagaggagcatgcttcat gtaatacagttgtaaaggaggttaaaaaggaaaacaaaggatcagaggtaaagacacaaaagccaactttggtgaaaatg aaatcaggagcaatgattgttcagtatccagaagaaatttccagctctccttcaagtaatggggtacattctaatactga ggacggaaaagcacttgaggaagtaaatgttaaagcaaggaaacaagacaacactgacacaattttacaagatcttgagg aagaaatactggaagaatctgtacagaagaccacaaa |
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Protein
| Protein ID | pfu_aug1.0_1938.1_00903.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1938.1_00903.t1 MARKEHKKHVKNLLAQAIVHKSLDLERTRQVEIRRKLEEIAKIELVRRVRVIYVDEHGRRLSPDRRDQERPQRGRPEEID TKHLYSLDSTALKKYALQLARIDQGEVSPYLLSPVPTPPRSSRGSRSGMVGQRLRVRPRTAEARSPYRERPSSGQVQSVS GSSKSSEISPKSTPKGTPRRRFQQQRFVEVYTFSFISRRHRGFPFSLSIFVDGRIDCRISTCCEYRHAKGVKLGGKMGHF SLLKVKGATPCYKCKLNSQASPRSLKRPPTFKKDKGQPEQMQEEVIVVDKRSVTVTQDEAKRSKQRVAKRDIVVSTTKAD DSEEIKGGNFEDDLSAEASKTTGNSSQDGVEEGSPLRTSTPLSKDCTPVVDWDEENDEPVVKRRESDTTNRAGKQVRFDV KVQKMGTPETSESNRNGDNDDTVGKVEPLYKDSDDKLMKELKELLDEDDGLDTCDEVSELETDLDSPRKDGEGRSRKTEK AKQKKGSKNVVDGSGSDLSVKNVEKELDDPKDSDKSSSSDSKRTKGQINNHKEDDSCESQMNADSHDHKNVNEAIIHAGE TTASVAHVGIEKLSVKKEDGEKESQTQSHDHTTMAESIIHAGETSAAITHVDIENLSHQKEGVSINTFEGSRGEEVESKA GVIKTLTESHNQTDKIALLAKTGDGETDQAKRSEETGTGCSFNDDRIIPEKVPSLKADFDSKEISEQEQLDDLSSDGSRK NLDIAPLPTEGEVIPSPIIDSPNEIQSLTPAGQNLDKKLPTKSDILAKEEHASCNTVVKEVKKENKGSEVKTQKPTLVKM KSGAMIVQYPEEISSSPSSNGVHSNTEDGKALEEVNVKARKQDNTDTILQDLEEEILEESVQKTT |
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