Gene
| Gene Model ID | pfu_aug1.0_1939.1_51474 |
|---|---|
| Locus | scaffold1939.1 : 22585 ... 35125 : - |
| To GenomeBrowser | scaffold1939.1:22585..35125 |
| Genes list of scaffold | scaffold1939.1 |
| Synonym | pfu_aug2.0_670.1_01027 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1939.1_51474.t1 | 1 | 1 | Pkinase | 71 | 106 | 1.8e-06 | 27.2 | 7.4e-10 | 2.8e-06 | 26.7 |
| pfu_aug1.0_1939.1_51474.t1 | 1 | 1 | Pkinase_C | 118 | 174 | 4.5e-09 | 36.6 | 1.9e-12 | 7.0e-09 | 36.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1939.1_51474.t1 | gi|47230282|emb|CAG10696.1| | unnamed protein product, partial [Tetraodon nigroviridis] | 2.0e-33 |
Transcript
| Transcript ID | pfu_aug1.0_1939.1_51474.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1939.1_51474.t1 atgaagcaggagaagccaaagcccaacacgtttataatccgcggcttacaatggacggtggtggtagagaggatgttctg tgtagagtctgcggaggaacgggaagattggatagcggctatacggtccgtagccgaagatctgaagggaacggaggaag atctgtctgataaaaaagtcactgataaaaagaaagtgacacttgaagactttgaatttctgaaagtgcttggaaaggga accttcggaaaagtcattttgtgcaaagaaaaggctacaaatcatctttatgccatcaaaattctaaagaaacaagttat tgttgccaagattacaccgcccttcaagcctcaagtgacctctgacactgacacacggtactttgatgatacattcacgg ttgaatcggtcagccttacgccccctggtgttcagactcatatagccagtacaagccagttggagagaatagaagaagag atggaaatgccgtatttcgagaagttttcataccatggcagtaagatgagccttgctaatagtcacacaagctgcatgag ttttgagacgacttggagtacttga |
|
Protein
| Protein ID | pfu_aug1.0_1939.1_51474.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1939.1_51474.t1 MKQEKPKPNTFIIRGLQWTVVVERMFCVESAEEREDWIAAIRSVAEDLKGTEEDLSDKKVTDKKKVTLEDFEFLKVLGKG TFGKVILCKEKATNHLYAIKILKKQVIVAKITPPFKPQVTSDTDTRYFDDTFTVESVSLTPPGVQTHIASTSQLERIEEE MEMPYFEKFSYHGSKMSLANSHTSCMSFETTWST |
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