Gene
| Gene Model ID | pfu_aug1.0_1941.1_44195 |
|---|---|
| Locus | scaffold1941.1 : 17346 ... 32067 : + |
| To GenomeBrowser | scaffold1941.1:17346..32067 |
| Genes list of scaffold | scaffold1941.1 |
| Synonym | pfu_aug2.0_87.1_23413 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1941.1_44195.t1 | 1 | 1 | Thiolase_N | 19 | 276 | 0.0 | 333.8 | 0.0 | 0.0 | 333.6 |
| pfu_aug1.0_1941.1_44195.t1 | 2 | 1 | ketoacyl-synt | 46 | 78 | 1.7e-06 | 27.6 | 0.068 | 250.0 | 0.9 |
| pfu_aug1.0_1941.1_44195.t1 | 2 | 2 | ketoacyl-synt | 92 | 137 | 1.7e-06 | 27.6 | 4.7e-10 | 1.7e-06 | 27.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1941.1_44195.t1 | gi|291228777|ref|XP_002734348.1| | PREDICTED: acetyl-CoA acetyltransferase, mitochondrial-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1941.1_44195.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1941.1_44195.t1 atgaacaaatcagctgttcctctgtgcaggtgtttcagtaaaatcagtggattaaatgatgtagtgatagccagtgctgt tcgaacacctattggatctttccaaagtactctcaaggatttgccggcgccaaaacttggatctgttgcaattaaagatg ctatcaatagagcaggaatcacagtggaggatgttgatgaggtatacatggggaatgtatgtacagccatggaaaaacaa gcaccttgtagacaggctgctctcggagctggtctgccgatcaaaacacccacaacgacagtgaacaaagtatgtgcttc cggtatgaaatctataatgatggctgctcaaagtctcatgtgtggacatcaggatgtgatggtagctggtgggatggaaa gtatgtctaatgtgccatattacttagaaaggggagccaccccatatggtaaagtagaattaaaggacggtattgtgttt gatggtttgactgatgcctatgataatatacacatgggaaactgtgcagaaaacacagccaagaaatattccataggaag agaggagcaggaccagtatgccatacgtagttataaactcagtcagaaggcagccgcagacggagtgtttcagaaagaaa tcacgcctgtctctgtaccaaaaaagaaaggagatcctgtagtagtaactgaagatgaggagtacaaaaaggttaacttt gacaagtttccatcattgagggctgttttccagaaggacggtacagtaactgcagccaatgccagtacattaaacgacgg tgcagcagcgttggtattgatgactgctcagacagcacagagattaaatgtcaaaccattagcacggatcctaggattcg ccgatgctgctgtaccacccattgattttcctattgcaccagcttttgcaattcctaagctctactggtcatag |
|
Protein
| Protein ID | pfu_aug1.0_1941.1_44195.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1941.1_44195.t1 MNKSAVPLCRCFSKISGLNDVVIASAVRTPIGSFQSTLKDLPAPKLGSVAIKDAINRAGITVEDVDEVYMGNVCTAMEKQ APCRQAALGAGLPIKTPTTTVNKVCASGMKSIMMAAQSLMCGHQDVMVAGGMESMSNVPYYLERGATPYGKVELKDGIVF DGLTDAYDNIHMGNCAENTAKKYSIGREEQDQYAIRSYKLSQKAAADGVFQKEITPVSVPKKKGDPVVVTEDEEYKKVNF DKFPSLRAVFQKDGTVTAANASTLNDGAAALVLMTAQTAQRLNVKPLARILGFADAAVPPIDFPIAPAFAIPKLYWS |
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