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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1946.1_44197
Locus scaffold1946.1 : 1 ... 12525 : -
To GenomeBrowser scaffold1946.1:1..12525
Genes list of scaffold scaffold1946.1
Synonym pfu_aug2.0_298.1_27188

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1946.1_44197.t1 2 1 Y_phosphatase 120 138 2.0e-06 27.2 0.37 1400.0 -1.6
pfu_aug1.0_1946.1_44197.t1 2 2 Y_phosphatase 164 196 2.0e-06 27.2 1.2e-09 4.6e-06 26.1

Transcript
Transcript IDpfu_aug1.0_1946.1_44197.t1
Definition-
>pfu_aug1.0_1946.1_44197.t1
atgctcaatttggtgctctattaaatggaaaatggagctctatgtgacgggtcatcgctatggtgcaagaattcaagcat
ttgtatcaacggaatctgtgggtgccgcagcggtttctatgacgacaacgaagtgtacgaggtcccaacagagatctgga
tcatagtggctgtaggtgggacctttcttatctccacatcggtctttctgttacatattttcagaaagaaagcacaaaag
agatatgtggatctaaagagtattgttataaaaccaactcaaccaagattgcggatgaagcgtaatgactttgatgaata
ccaatctatgagccagttatcagacccaaccaaaagacctcttgacatcaacattgtacagaacaatcagttaatggaaa
aatggatcgctactgtcttaccagacgaatgggagaaattgaaagaactgactcaacggtatccttttgaggacgctgtt
tctgaaaagaacaagttcaagaaccgtgatatgggctgtattccatatgatatgaatagagtgaaactggacgttggaga
agatgactacatcaatgccagttacatatcg

Protein
Protein IDpfu_aug1.0_1946.1_44197.t1
Definition-
>pfu_aug1.0_1946.1_44197.t1
MLNLVLYXMENGALCDGSSLWCKNSSICINGICGCRSGFYDDNEVYEVPTEIWIIVAVGGTFLISTSVFLLHIFRKKAQK
RYVDLKSIVIKPTQPRLRMKRNDFDEYQSMSQLSDPTKRPLDINIVQNNQLMEKWIATVLPDEWEKLKELTQRYPFEDAV
SEKNKFKNRDMGCIPYDMNRVKLDVGEDDYINASYIS

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