Gene
| Gene Model ID | pfu_aug1.0_19485.1_04010 |
|---|---|
| Locus | scaffold19485.1 : 8174 ... 17355 : - |
| To GenomeBrowser | scaffold19485.1:8174..17355 |
| Genes list of scaffold | scaffold19485.1 |
| Synonym | pfu_aug2.0_1979.1_31993 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19485.1_04010.t1 | 1 | 1 | Acetyltransf_7 | 65 | 141 | 1.3e-08 | 34.8 | 1.2e-11 | 2.5e-08 | 33.9 |
| pfu_aug1.0_19485.1_04010.t1 | 1 | 1 | Acetyltransf_1 | 79 | 141 | 1.0e-14 | 54.3 | 6.0e-18 | 1.3e-14 | 53.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_19485.1_04010.t1 | gi|260818286|ref|XP_002604314.1| | hypothetical protein BRAFLDRAFT_125265 [Branchiostoma floridae] | 2.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_19485.1_04010.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19485.1_04010.t1 atggacagcggaaccttacccccaataacatcccaaccaaacagtggatatgggcttggttcatcccctcccggagcccc ggggagtgggggagaagtcactgttaggaacctaacaaatacttccgaggattgtgcttttgcagggagactttgcgtgg agggattcagaagtaaaatggtgcatgcaactagtgaagaagcgcttatgtgcatgatcatcacactaacaatcccagta ccaaaacaaacctgcatggtggactgtatcgcagtggaagacaaatttcggggaaaaggcattggcaagattttactgga tcgggcggagtttgacgcgaagaaacgaaattgcaataccatgatgctctacgtcatgactacaaacagagcagtacatc tgtatgagagacaaggatacgaaatcaaaggctccaaatgctgctgtatgaaatgcgcaacaggagaatctaaagctttt aggatggaaaagcagttgtcgtaa |
|
Protein
| Protein ID | pfu_aug1.0_19485.1_04010.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19485.1_04010.t1 MDSGTLPPITSQPNSGYGLGSSPPGAPGSGGEVTVRNLTNTSEDCAFAGRLCVEGFRSKMVHATSEEALMCMIITLTIPV PKQTCMVDCIAVEDKFRGKGIGKILLDRAEFDAKKRNCNTMMLYVMTTNRAVHLYERQGYEIKGSKCCCMKCATGESKAF RMEKQLS |
|