Gene
| Gene Model ID | pfu_aug1.0_19491.1_69271 |
|---|---|
| Locus | scaffold19491.1 : 1646 ... 9285 : + |
| To GenomeBrowser | scaffold19491.1:1646..9285 |
| Genes list of scaffold | scaffold19491.1 |
| Synonym | pfu_aug2.0_819.1_31190 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19491.1_69271.t1 | 1 | 1 | DUF605 | 9 | 84 | 5.0e-17 | 62.3 | 7.9e-21 | 5.9e-17 | 62.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_19491.1_69271.t1 | gi|260807979|ref|XP_002598785.1| | hypothetical protein BRAFLDRAFT_58151 [Branchiostoma floridae] | 7.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_19491.1_69271.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19491.1_69271.t1 atgtacccagctgcaggggcacacgccccaccttccacaccccaggatccaggtcataggtcacctcaacaacccaaacc tgtaccccaacaagaagtatggcagcctccagaaaatcccagtggtgttcagttacatgcggaggactatcagaaagcca tgaagtattgtaaatacgccagcagtgctctacaatacgaagatccttctacggccatatcaaatctaaccaaagccctc aaactactgacgacgggcaaagaaacgtag |
|
Protein
| Protein ID | pfu_aug1.0_19491.1_69271.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19491.1_69271.t1 MYPAAGAHAPPSTPQDPGHRSPQQPKPVPQQEVWQPPENPSGVQLHAEDYQKAMKYCKYASSALQYEDPSTAISNLTKAL KLLTTGKET |
|