Gene
| Gene Model ID | pfu_aug1.0_1951.1_08181 |
|---|---|
| Locus | scaffold1951.1 : 19616 ... 29649 : + |
| To GenomeBrowser | scaffold1951.1:19616..29649 |
| Genes list of scaffold | scaffold1951.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1951.1_08181.t1 | 1 | 1 | HSP70 | 54 | 239 | 5.2e-07 | 27.9 | 1.3e-08 | 9.3e-05 | 20.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1951.1_08181.t1 | gi|260809224|ref|XP_002599406.1| | hypothetical protein BRAFLDRAFT_242762 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1951.1_08181.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1951.1_08181.t1 atgctcaacttggtgctctattgaatacacccgaccaacctgacactagcctacgaaccagaagtagcagccattctttg cagacatctatctacagacaagattattggatcaggcgttggctcaattataaaaatctttgaagttggagttgttttca tagttgttgaccttggaggaggcacagttgatgttacagtgcaaagagtgacagagaagggaaaactttctcacgtccat gttgcaagtggtggccaatggggaggaactaccgtcaaccaagcattcatgacctttctgggtgaaatctttacagagga ggttatgaatacatttcgtgatagtgagatgtcggagtatctattcctaacacgtactttcgaaattaagaaaagggaag ccaatggtgattcaagtgatcgggttgtcattcgtattcctcaatgtctcatagatatttacaacgagagcagtgaaatg gacgtcagggaaaaaataaaatctttacatgaagacaaagtaagtcttaaacgagataaactatttttgcatcgcaaagt attcaagtcgtttttcaaatgttcaattgacaaaactgtgaatcatttgagaagtttattgaagaaggaggagtgtaaaa acgtgtctttcatgctgttggtcggaggatacgcagaatgtcctttgataagcgaagcgattcggagagaattttctgcg atacgagtgatcatacctacaggatcggattgcggattggctgtactgaaaggtgctgccatctatggtcacgatccaag catagtggaatctaggaaatgtccttacacatacggaatcgccgttcataagccatacgatccaaatattcatgctcagt caagaagctttaagatggatggtaaagagcgagtagaagactgctttgagaaattatttacgatagacgaaatgattcct ataggctgcaaacgatccattcctgtccataatactcactatgagaaagaaagacaagaatggagaacagaacacaaaga gattgagttctactcatcgaagaatcagaatcctctatatgtcaccgataaagattgcaaacttcatggaaaaattctag tacctccacctggcggcttatggcctgagctaacagagggcgctgtggaagttgaagttggtggaactgaaatgcttgtg agatacgttgataaacattcgtcacaaattgttacgggtaatgtgaactttttcccgaataacacagaaccggattgtga tcattttagtgatgaaacgacagtttag |
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Protein
| Protein ID | pfu_aug1.0_1951.1_08181.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1951.1_08181.t1 MLNLVLYXIHPTNLTLAYEPEVAAILCRHLSTDKIIGSGVGSIIKIFEVGVVFIVVDLGGGTVDVTVQRVTEKGKLSHVH VASGGQWGGTTVNQAFMTFLGEIFTEEVMNTFRDSEMSEYLFLTRTFEIKKREANGDSSDRVVIRIPQCLIDIYNESSEM DVREKIKSLHEDKVSLKRDKLFLHRKVFKSFFKCSIDKTVNHLRSLLKKEECKNVSFMLLVGGYAECPLISEAIRREFSA IRVIIPTGSDCGLAVLKGAAIYGHDPSIVESRKCPYTYGIAVHKPYDPNIHAQSRSFKMDGKERVEDCFEKLFTIDEMIP IGCKRSIPVHNTHYEKERQEWRTEHKEIEFYSSKNQNPLYVTDKDCKLHGKILVPPPGGLWPELTEGAVEVEVGGTEMLV RYVDKHSSQIVTGNVNFFPNNTEPDCDHFSDETTV |
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