Gene
| Gene Model ID | pfu_aug1.0_19530.1_47318 |
|---|---|
| Locus | scaffold19530.1 : 18266 ... 26707 : + |
| To GenomeBrowser | scaffold19530.1:18266..26707 |
| Genes list of scaffold | scaffold19530.1 |
| Synonym | pfu_aug2.0_255.1_17190 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19530.1_47318.t1 | 3 | 1 | Lectin_leg-like | 2 | 21 | 9.0e-19 | 67.5 | 6.7e-06 | 0.05 | 12.7 |
| pfu_aug1.0_19530.1_47318.t1 | 3 | 2 | Lectin_leg-like | 21 | 70 | 9.0e-19 | 67.5 | 8.4e-19 | 6.2e-15 | 54.9 |
| pfu_aug1.0_19530.1_47318.t1 | 3 | 3 | Lectin_leg-like | 77 | 112 | 9.0e-19 | 67.5 | 0.11 | 830.0 | -1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_19530.1_47318.t1 | gi|36938588|gb|AAQ86834.1| | mannose-binding endoplasmic reticulum-Golgi intermediate compartment lectin [Ixodes scapularis] | 1.0e-31 |
Transcript
| Transcript ID | pfu_aug1.0_19530.1_47318.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19530.1_47318.t1 atgcataataatccctatgtaatggccatggtgaatgacggaactaaacagtttgatcatcagagtggattaacaaataa caaagatgactttgagatgtgcttacgtcaagagaatgtagaacttccgactaacggttattttggagtgtcagctgcta ctgggggtttagctgatgatcatgatgtttttgctttcctgacccattccttactagcagatggagaacagccaactgtt ggtcaaattcctgattcagacaaacagaaatatgaaaaagaatttgatgagtactacaaagaattagagcaagccaagca agattatcagaagcagcacccagataaagctcctcaagattttgaaggaatggtgagttag |
|
Protein
| Protein ID | pfu_aug1.0_19530.1_47318.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19530.1_47318.t1 MHNNPYVMAMVNDGTKQFDHQSGLTNNKDDFEMCLRQENVELPTNGYFGVSAATGGLADDHDVFAFLTHSLLADGEQPTV GQIPDSDKQKYEKEFDEYYKELEQAKQDYQKQHPDKAPQDFEGMVS |
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