Gene
| Gene Model ID | pfu_aug1.0_1954.1_66161 |
|---|---|
| Locus | scaffold1954.1 : 15315 ... 26155 : - |
| To GenomeBrowser | scaffold1954.1:15315..26155 |
| Genes list of scaffold | scaffold1954.1 |
| Synonym | pfu_aug2.0_4260.1_02594 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1954.1_66161.t1 | 2 | 1 | Ig_2 | 55 | 132 | 4.2e-12 | 46.0 | 1.0e-06 | 0.0026 | 17.8 |
| pfu_aug1.0_1954.1_66161.t1 | 2 | 1 | Ig_3 | 66 | 122 | 4.2e-08 | 33.5 | 2.5e-07 | 0.00063 | 20.1 |
| pfu_aug1.0_1954.1_66161.t1 | 2 | 1 | I-set | 66 | 97 | 1.7e-06 | 27.7 | 0.0021 | 5.1 | 7.0 |
| pfu_aug1.0_1954.1_66161.t1 | 2 | 2 | Ig_3 | 252 | 293 | 4.2e-08 | 33.5 | 8.7e-07 | 0.0022 | 18.4 |
| pfu_aug1.0_1954.1_66161.t1 | 2 | 2 | Ig_2 | 256 | 307 | 4.2e-12 | 46.0 | 2.2e-10 | 5.4e-07 | 29.6 |
| pfu_aug1.0_1954.1_66161.t1 | 2 | 2 | I-set | 272 | 296 | 1.7e-06 | 27.7 | 8.6e-07 | 0.0021 | 17.8 |
Transcript
| Transcript ID | pfu_aug1.0_1954.1_66161.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1954.1_66161.t1 atgaaaccgaaaatcgagaggcggcttcctcttcatagtctgatcacaatttgtacatatcatgaattcgttgacgcatc aacgtcaaatgacgggcgtataaaatcaaggatacttactgcagagagcaatgatgacaatgtaacactatctactgtcg ttgtcaacaccagccctagtagaacgtattattatatagaagagaggaaaagacttcagataacatgtaccgctaactgt gacccgccatgtcagtatcagtggtatcaccgaaacttcgaagtccacggcagtgttctcaatgtgaacgtgaccaagga gatggactatgacgcatatggaccactgctctgcctggcctctaatgaagaatcgggacctttcagttcacaagagatac gtatctacgttcaaaatggtaaatttagaaaaattccatcatggatcgatattgaggaaggagaaacactaaccacctgc ctgctggaaaattctcatgagtgcgattggaactgtgatctgtatgatccattcggtcagctttataatggttatgatca gagttgtcacagcatccgcatggaacgatatcttagtggaaggtggtactggcactacaatggctatagtaacttctact tcacagtcaatatctttatcacacccccaagtcatgtcttaattcctgatgaaagaaatataactgttaacggttcaaac agaagtgcactcggaccaattagattcgttggaagatgcagtccactctgtacctatgtttggtacaaagacaataacac attctcctttggcaatacactgtacataaccaatgtggatacaagtgacagtggatactacgaatgtcgagtttacaatg gtactgaggtgatagatatgacttcagttgacatatttgtctatgacgactag |
|
Protein
| Protein ID | pfu_aug1.0_1954.1_66161.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1954.1_66161.t1 MKPKIERRLPLHSLITICTYHEFVDASTSNDGRIKSRILTAESNDDNVTLSTVVVNTSPSRTYYYIEERKRLQITCTANC DPPCQYQWYHRNFEVHGSVLNVNVTKEMDYDAYGPLLCLASNEESGPFSSQEIRIYVQNGKFRKIPSWIDIEEGETLTTC LLENSHECDWNCDLYDPFGQLYNGYDQSCHSIRMERYLSGRWYWHYNGYSNFYFTVNIFITPPSHVLIPDERNITVNGSN RSALGPIRFVGRCSPLCTYVWYKDNNTFSFGNTLYITNVDTSDSGYYECRVYNGTEVIDMTSVDIFVYDD |
|