Gene
| Gene Model ID | pfu_aug1.0_19559.1_61926 |
|---|---|
| Locus | scaffold19559.1 : 9116 ... 19212 : + |
| To GenomeBrowser | scaffold19559.1:9116..19212 |
| Genes list of scaffold | scaffold19559.1 |
| Synonym | pfu_aug2.0_358.1_27290 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19559.1_61926.t1 | 2 | 1 | BRICHOS | 117 | 136 | 3.1e-11 | 42.9 | 0.13 | 1900.0 | -1.2 |
| pfu_aug1.0_19559.1_61926.t1 | 2 | 2 | BRICHOS | 144 | 193 | 3.1e-11 | 42.9 | 6.6e-15 | 9.7e-11 | 41.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_19559.1_61926.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19559.1_61926.t1 atgcatatcctattaaacatcaagacagacatcatcctattagacatcctatcatatcagatatctgatcagatcagaca ttctattttacaaattacagtatcagacaacttatcagacactgcatcagacatcctatcagacaacataaagggcattt tacgtctttcagccaattttgaagccatatctttcggtgaattacacatatacagaggaagatgtggttttacggcattg tttgatgaggaacagaaagatctaacagataacggaactccacatgccatggcccagaacgacaaagcaaaggtagaccc tcagaaacacgctgtcaaggtcaaaccaaagaggtacaacatgcaagaggacgtgcaagtcattgatgataaaatcgaga aaattcacatgccatccttcagagacttcagagacacaatgatccttcacgatttcgagaagaattattcagccattgtg gactaccagatgcaagcctgctatgtcatgaaacttgatagaaaacgagtttccccacccagagactggattgatctcat tcagaaatttgcagtaggaatcttcaagagaagcacaggtactcatctgcaatatgcctactatgaaccaactggggagc acttgcaggccattgatatctcgttatataattaa |
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Protein
| Protein ID | pfu_aug1.0_19559.1_61926.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19559.1_61926.t1 MHILLNIKTDIILLDILSYQISDQIRHSILQITVSDNLSDTASDILSDNIKGILRLSANFEAISFGELHIYRGRCGFTAL FDEEQKDLTDNGTPHAMAQNDKAKVDPQKHAVKVKPKRYNMQEDVQVIDDKIEKIHMPSFRDFRDTMILHDFEKNYSAIV DYQMQACYVMKLDRKRVSPPRDWIDLIQKFAVGIFKRSTGTHLQYAYYEPTGEHLQAIDISLYN |
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