Gene
| Gene Model ID | pfu_aug1.0_19559.1_61927 |
|---|---|
| Locus | scaffold19559.1 : 20749 ... 25035 : - |
| To GenomeBrowser | scaffold19559.1:20749..25035 |
| Genes list of scaffold | scaffold19559.1 |
| Synonym | pfu_aug2.0_358.1_27289 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19559.1_61927.t1 | 1 | 1 | An_peroxidase | 5 | 352 | 0.0 | 312.2 | 0.0 | 0.0 | 311.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_19559.1_61927.t1 | gi|260782024|ref|XP_002586093.1| | hypothetical protein BRAFLDRAFT_252340 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_19559.1_61927.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19559.1_61927.t1 atgtttgagagaggcatgttacctaaaagtgaaaaggttaaatgcatgaaggaaatgaagaatgattactgttttgctgc aggtgatgacagaagcatggttgttccatctctatcatatgtacataccctcttcgttagagaacacaatcgtcttgctt ctaagttagctcttctgaatccacactgggatgacgaaagaatctaccaagaatccagaaagatcgtttcagccttaatg cagcagataacatacgtggagtaccttccgcttgtattgggcaaagagtgtctggagaagaatcaaataatgatcaagtc tccggactttgacactgtgtatgatcccacagaggatgccagtacagcaaacgtgttctccacggcggcctttaggttcg gtcactcacagatacctaatcaccaggccatagcaggtaaagatggcatcatccggggtgttctacccattgagaaaact tttaacaggccttcattcatgcttcagaacaatggtttgggctatgacggtgtagggaactgggtggttaacgatgtaca ggctaaggatgatcggttcctggatgatggtgtgaggaataagttatttctggacgacaaaggtcgatcgttcgatttat cagcactgaatattcagagaggacgcgaccatggtttgccatcttacaattcctggagacttatttgtgggctgcctacg gccaagcattttggtattggtccaggtgggctagtcgatatagacgccgaagctgctgtcaagttcaggaaattatacag gcatacagacgacatagatttatttccagcggccatgtctgagaggaagattccaggctcactagttggaccaacatttg cctgtattcttgcaaaacaattccgaaaatatcgccttggtgaccgattctggtatgaaaataacttcaatgaaatagga tttaccaaagatcaacttattcaaatcaagaaaatgagattatctagtgttatgtgtgccaatacaaggataagaagtat tcagtttggcgctttccaagttccatcaatgcagtaa |
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Protein
| Protein ID | pfu_aug1.0_19559.1_61927.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19559.1_61927.t1 MFERGMLPKSEKVKCMKEMKNDYCFAAGDDRSMVVPSLSYVHTLFVREHNRLASKLALLNPHWDDERIYQESRKIVSALM QQITYVEYLPLVLGKECLEKNQIMIKSPDFDTVYDPTEDASTANVFSTAAFRFGHSQIPNHQAIAGKDGIIRGVLPIEKT FNRPSFMLQNNGLGYDGVGNWVVNDVQAKDDRFLDDGVRNKLFLDDKGRSFDLSALNIQRGRDHGLPSYNSWRLICGLPT AKHFGIGPGGLVDIDAEAAVKFRKLYRHTDDIDLFPAAMSERKIPGSLVGPTFACILAKQFRKYRLGDRFWYENNFNEIG FTKDQLIQIKKMRLSSVMCANTRIRSIQFGAFQVPSMQ |
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