Gene
| Gene Model ID | pfu_aug1.0_19570.1_11236 |
|---|---|
| Locus | scaffold19570.1 : 23296 ... 33078 : + |
| To GenomeBrowser | scaffold19570.1:23296..33078 |
| Genes list of scaffold | scaffold19570.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19570.1_11236.t1 | 1 | 1 | TGS | 28 | 70 | 1.8e-07 | 30.8 | 1.6e-11 | 2.3e-07 | 30.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_19570.1_11236.t1 | gi|291238092|ref|XP_002738958.1| | PREDICTED: 39S ribosomal protein L39, mitochondrial-like [Saccoglossus kowalevskii] | 1.0e-32 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_19570.1_11236.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19570.1_11236.t1 atgataaaacgtattgagaagatacaggtgaattatcaaggcgttcctgatccctgcacgctggttatgaacaaaggact ctccactccatataactgtgccatgcacataggagaacacatcacacagaaatcagctctagccatagtgaatgatgaat tatgggatatgcatcgacctctgacagaagattgtacgttacagcttcttcactttcaggatgatgatcccacttccctt aataaggcattttggacatcctgttcctttttgctcggtcacatgttggagacagcctttaaagatcagtattacgttca actctgcggattccccaggtag |
|
Protein
| Protein ID | pfu_aug1.0_19570.1_11236.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19570.1_11236.t1 MIKRIEKIQVNYQGVPDPCTLVMNKGLSTPYNCAMHIGEHITQKSALAIVNDELWDMHRPLTEDCTLQLLHFQDDDPTSL NKAFWTSCSFLLGHMLETAFKDQYYVQLCGFPR |
|