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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_19570.1_11237
Locus scaffold19570.1 : 33156 ... 37829 : +
To GenomeBrowser scaffold19570.1:33156..37829
Genes list of scaffold scaffold19570.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_19570.1_11237.t1 gi|241998238|ref|XP_002433762.1| 39S ribosomal protein L39, putative [Ixodes scapularis] 7.0e-23

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
egg-4cell 1
8-16cell 1
>Adult tissues
mantle 1

Transcript
Transcript IDpfu_aug1.0_19570.1_11237.t1
Definition-
>pfu_aug1.0_19570.1_11237.t1
atgttattttgttggtctgatgggcaaaaacatcttgagtccggctcctttgttcatgatgttcacataaatacaccgtt
tccatggaatccaacctcgatagagttacagattcttggaaagattataaccaagctcgcgatgcaagacgccaaatttg
aacgattagaggtagacgcctctgtcgcccaagaaatgttctccgacaaccagtataaagccgatcagattccacaaata
gcatcaaaatccatgtccggtaacaaggtcacgttgtacagagtggacaatcacatagatatttctgtggggccaatgat
agccagctcagcacatattggaatatttaacgtaacagcatatttatgtaacttgtgtgattttaatgaatgtaaagaca
acacaactcattttataaatacagtataa

Protein
Protein IDpfu_aug1.0_19570.1_11237.t1
Definition-
>pfu_aug1.0_19570.1_11237.t1
MLFCWSDGQKHLESGSFVHDVHINTPFPWNPTSIELQILGKIITKLAMQDAKFERLEVDASVAQEMFSDNQYKADQIPQI
ASKSMSGNKVTLYRVDNHIDISVGPMIASSAHIGIFNVTAYLCNLCDFNECKDNTTHFINTV

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