Gene
| Gene Model ID | pfu_aug1.0_19590.1_04015 |
|---|---|
| Locus | scaffold19590.1 : 2665 ... 4435 : - |
| To GenomeBrowser | scaffold19590.1:2665..4435 |
| Genes list of scaffold | scaffold19590.1 |
| Synonym | pfu_aug2.0_184.1_13745 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19590.1_04015.t1 | 1 | 1 | CENP-B_N | 51 | 102 | 5.2e-10 | 38.5 | 5.6e-13 | 9.2e-10 | 37.7 |
| pfu_aug1.0_19590.1_04015.t1 | 1 | 1 | HTH_28 | 61 | 96 | 6.3e-06 | 26.0 | 1.3e-08 | 2.2e-05 | 24.3 |
| pfu_aug1.0_19590.1_04015.t1 | 1 | 1 | HTH_Tnp_Tc5 | 120 | 161 | 1.9e-08 | 33.9 | 3.8e-11 | 6.2e-08 | 32.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_19590.1_04015.t1 | gi|328724618|ref|XP_003248201.1| | 1.0e-15 |
Transcript
| Transcript ID | pfu_aug1.0_19590.1_04015.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19590.1_04015.t1 atgtatcatagtttcaacaactttagaagaatgacagaattccagaatcctgtaggcagcctaggtgagcaatccagtga aggacccaggtctcatccaggggggataactggatcaccggccgctacagtgcagaagaagggtacgaagagaaagctgg atctaaagacttatgagacaaagtacgatgccatcatggaggttgagagggggtccttgtcaaagaaacaggtcgctgaa aagtttgccatatccgcttcaacgctctcaacatggctgaaaaacgccgactctattaaagagaaggttacagccagtaa tgttgagcctcaacgcaaaaagaacagagtggccaagtttcctgaagtcgaggacgcactcttaaaatggtttgcaaatg ccagaacccataacgtgacagtctcaggggagatgatgcgagagaaggccagagacttcgcactcaaactgggagttcca gactccaagttcgaatgttcagttggatttgccttcactgagcccgaccaggtcgccgagtccatagatgatgatgacga cgacgatccagacgatgatttaccactggcaagtctcatgaacgtcgctccagtcgtctcaatgagtgactttgtagctg cagacgatgatgtaccgacgtgcgccgacctcggcgacgacgatatcatcgaggggatcgtctccgccagaaatggcaac gacgacgagagtgacgatgaggaaccagcgcaaccaccaacccgaccaacaatctacagtgccgtagttgcctttgacac cctgaggtccttttttgacgcacacaacggcggagatcgagtgaaccaagccctagccgatctcaactccatgttggtcg acgcccaccggacgaagatgtatactcggcagacagcaatgaccgattacgtgaagcagacagacagagcagaggggccg agagggtga |
|
Protein
| Protein ID | pfu_aug1.0_19590.1_04015.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19590.1_04015.t1 MYHSFNNFRRMTEFQNPVGSLGEQSSEGPRSHPGGITGSPAATVQKKGTKRKLDLKTYETKYDAIMEVERGSLSKKQVAE KFAISASTLSTWLKNADSIKEKVTASNVEPQRKKNRVAKFPEVEDALLKWFANARTHNVTVSGEMMREKARDFALKLGVP DSKFECSVGFAFTEPDQVAESIDDDDDDDPDDDLPLASLMNVAPVVSMSDFVAADDDVPTCADLGDDDIIEGIVSARNGN DDESDDEEPAQPPTRPTIYSAVVAFDTLRSFFDAHNGGDRVNQALADLNSMLVDAHRTKMYTRQTAMTDYVKQTDRAEGP RG |
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