Gene
| Gene Model ID | pfu_aug1.0_19636.1_40167 |
|---|---|
| Locus | scaffold19636.1 : 1 ... 3895 : - |
| To GenomeBrowser | scaffold19636.1:1..3895 |
| Genes list of scaffold | scaffold19636.1 |
| Synonym | pfu_aug2.0_27.1_23263 |
Manual annotation
| Study field | other |
|---|---|
| Gene name | calmodulin like |
| Description | Blast best hit to NCBI XP_002735410.1 (Saccoglossus kowalevskii) |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19636.1_40167.t1 | 3 | 1 | EF-hand_8 | 2 | 39 | 8.0e-25 | 86.2 | 3.9e-13 | 5.3e-10 | 38.7 |
| pfu_aug1.0_19636.1_40167.t1 | 2 | 1 | EF-hand_9 | 3 | 38 | 3.8e-10 | 39.5 | 7.5e-08 | 0.0001 | 22.1 |
| pfu_aug1.0_19636.1_40167.t1 | 2 | 1 | EF-hand_7 | 4 | 37 | 1.1e-24 | 86.3 | 2.5e-10 | 3.4e-07 | 30.2 |
| pfu_aug1.0_19636.1_40167.t1 | 3 | 1 | EF-hand_1 | 12 | 39 | 2.1e-24 | 82.8 | 7.8e-12 | 1.1e-08 | 33.8 |
| pfu_aug1.0_19636.1_40167.t1 | 3 | 1 | EF-hand_6 | 13 | 39 | 4.8e-17 | 60.2 | 7.2e-08 | 9.7e-05 | 21.9 |
| pfu_aug1.0_19636.1_40167.t1 | 3 | 1 | EF-hand_5 | 13 | 37 | 3.8e-14 | 51.2 | 6.4e-08 | 8.6e-05 | 21.7 |
| pfu_aug1.0_19636.1_40167.t1 | 3 | 2 | EF-hand_8 | 47 | 66 | 8.0e-25 | 86.2 | 3.3e-05 | 0.045 | 13.3 |
| pfu_aug1.0_19636.1_40167.t1 | 2 | 2 | EF-hand_7 | 49 | 103 | 1.1e-24 | 86.3 | 3.0e-19 | 4.0e-16 | 58.8 |
| pfu_aug1.0_19636.1_40167.t1 | 3 | 2 | EF-hand_1 | 50 | 77 | 2.1e-24 | 82.8 | 3.3e-11 | 4.5e-08 | 31.8 |
| pfu_aug1.0_19636.1_40167.t1 | 3 | 2 | EF-hand_6 | 50 | 78 | 4.8e-17 | 60.2 | 2.7e-11 | 3.7e-08 | 32.5 |
| pfu_aug1.0_19636.1_40167.t1 | 3 | 2 | EF-hand_5 | 50 | 74 | 3.8e-14 | 51.2 | 1.4e-06 | 0.0019 | 17.4 |
| pfu_aug1.0_19636.1_40167.t1 | 2 | 2 | EF-hand_9 | 53 | 99 | 3.8e-10 | 39.5 | 6.9e-06 | 0.0093 | 15.8 |
| pfu_aug1.0_19636.1_40167.t1 | 3 | 3 | EF-hand_8 | 63 | 103 | 8.0e-25 | 86.2 | 2.2e-15 | 3.0e-12 | 45.9 |
| pfu_aug1.0_19636.1_40167.t1 | 3 | 3 | EF-hand_1 | 85 | 103 | 2.1e-24 | 82.8 | 3.6e-08 | 4.9e-05 | 22.3 |
| pfu_aug1.0_19636.1_40167.t1 | 3 | 3 | EF-hand_5 | 90 | 102 | 3.8e-14 | 51.2 | 7.8e-06 | 0.011 | 15.1 |
| pfu_aug1.0_19636.1_40167.t1 | 3 | 3 | EF-hand_6 | 91 | 103 | 4.8e-17 | 60.2 | 0.0017 | 2.3 | 8.3 |
Transcript
| Transcript ID | pfu_aug1.0_19636.1_40167.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19636.1_40167.t1 atgaggtccctgggggaatccccgtcagaggacgagttagaggaccttatcaacgaaatagacgtcgacggtaatggtga aattgattttgacgaatttctgaccatgatggcgaagaagcagaacgccattgacgccgaggatcagatcagggaagcat ttaaggtgtttgacaaggacaatctagggtacataactgcgtcagaactccgccgtataatgacgaccctgggagacaag ctgccggacgaggaggtggacgagatgatagaggaagtagacttggacggggacggaaaaattgattatttag |
|
Protein
| Protein ID | pfu_aug1.0_19636.1_40167.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19636.1_40167.t1 MRSLGESPSEDELEDLINEIDVDGNGEIDFDEFLTMMAKKQNAIDAEDQIREAFKVFDKDNLGYITASELRRIMTTLGDK LPDEEVDEMIEEVDLDGDGKIDYL |
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