Gene
| Gene Model ID | pfu_aug1.0_1964.1_08185 |
|---|---|
| Locus | scaffold1964.1 : 2607 ... 23625 : - |
| To GenomeBrowser | scaffold1964.1:2607..23625 |
| Genes list of scaffold | scaffold1964.1 |
| Synonym | pfu_aug2.0_402.1_07466 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1964.1_08185.t1 | 1 | 1 | DUF3449 | 161 | 189 | 4.0e-07 | 29.7 | 1.2e-10 | 1.7e-06 | 27.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1964.1_08185.t1 | gi|156547467|ref|XP_001606271.1| | PREDICTED: splicing factor 3A subunit 3 [Nasonia vitripennis] | 2.0e-19 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1964.1_08185.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1964.1_08185.t1 atggtacatcggagatcagcgagattcgtcggtcacatttacgcttatcaacctgacaccgttacagcacttctggaaga agtgaaattaccacctctacaagagagacggaaaacatcacgtctacgtactacgcttccacaaagcagtccatcagaag tttttctcatcgcttattttactattacatgtaaatcattacttcttgcaaaaataacgagaaaacgatctgatgttatt ttattctgtaatgatttaaacattaaaagagttcatgaaaagtatcggttgtatcggatttaccgtacttttgaggtgat tctttttcagataagtgttcctatgtcagttgaatttgatgagattacaaaaatgagagaaaattctggagaggagacac agaaccttgtggagtttacagatgaagagggctatgggaaataccttgatctacatgaatgttatgtcaaatttataaac ctgaaaggcatggaggaagaatttgaggacacgagtggtaatgtgttcaacaagaagacgtatgaagatctaaaaagaca aggactactgtga |
|
Protein
| Protein ID | pfu_aug1.0_1964.1_08185.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1964.1_08185.t1 MVHRRSARFVGHIYAYQPDTVTALLEEVKLPPLQERRKTSRLRTTLPQSSPSEVFLIAYFTITCKSLLLAKITRKRSDVI LFCNDLNIKRVHEKYRLYRIYRTFEVILFQISVPMSVEFDEITKMRENSGEETQNLVEFTDEEGYGKYLDLHECYVKFIN LKGMEEEFEDTSGNVFNKKTYEDLKRQGLL |
|