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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1964.1_08186
Locus scaffold1964.1 : 24036 ... 33585 : -
To GenomeBrowser scaffold1964.1:24036..33585
Genes list of scaffold scaffold1964.1
Synonym pfu_aug2.0_402.1_07467

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1964.1_08186.t1 gi|241239424|ref|XP_002401541.1| conserved hypothetical protein [Ixodes scapularis] 2.0e-20

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
>Adult tissues
mantlePallium 1

Transcript
Transcript IDpfu_aug1.0_1964.1_08186.t1
Definition-
>pfu_aug1.0_1964.1_08186.t1
atgagaaaaagagggaaaaatcgccgaaaacgaatatttcaagacaagatcttattgaaggatcaggggactcaaatcaa
atcaagtcaagcaacagttgtgtcaggagaagcctcagaatctgatgaagatgaagaaacagataaagatgggataactc
ctcttaaagttgatacagggaaaaagggggacagggatgacattacaagtggggagattccccttacccctacctcccca
gggacaagatatacattggacataccaatatatgacagtttgcttcacagaaaattgagggaacgtaatggtataatgag
acgacatatcatagacacagttcaacaggtctataactcagcatccaaggaccttcacaataccacgttacaacttcata
aatcacagtcttcagtaatggatgcctcacaccatctgaagctattgaccaatgacctgttttacctggaggataaaatg
gacattgttagtaactgccctatactgccagatattcattttccctcaaaacaaacaactacataa

Protein
Protein IDpfu_aug1.0_1964.1_08186.t1
Definition-
>pfu_aug1.0_1964.1_08186.t1
MRKRGKNRRKRIFQDKILLKDQGTQIKSSQATVVSGEASESDEDEETDKDGITPLKVDTGKKGDRDDITSGEIPLTPTSP
GTRYTLDIPIYDSLLHRKLRERNGIMRRHIIDTVQQVYNSASKDLHNTTLQLHKSQSSVMDASHHLKLLTNDLFYLEDKM
DIVSNCPILPDIHFPSKQTTT

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