Gene
| Gene Model ID | pfu_aug1.0_19648.1_11244 |
|---|---|
| Locus | scaffold19648.1 : 3666 ... 10411 : + |
| To GenomeBrowser | scaffold19648.1:3666..10411 |
| Genes list of scaffold | scaffold19648.1 |
| Synonym | pfu_aug2.0_801.1_04581 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19648.1_11244.t1 | 1 | 1 | FSH1 | 4 | 59 | 6.3e-10 | 38.8 | 4.3e-14 | 6.4e-10 | 38.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_19648.1_11244.t1 | gi|260790252|ref|XP_002590157.1| | hypothetical protein BRAFLDRAFT_126058 [Branchiostoma floridae] | 5.0e-13 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_19648.1_11244.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19648.1_11244.t1 atgctgagtcttatatgtggtttacagaaacaaaatccagatggaccgtttaagtttgactttgtgatacttgttgctgg gttccacagtcgtcaaaaacctcatgatgaattatacagtcagaagttcacagttccatccttacatgtgtttggtgata cagacaaagttatacctaaag |
|
Protein
| Protein ID | pfu_aug1.0_19648.1_11244.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19648.1_11244.t1 MLSLICGLQKQNPDGPFKFDFVILVAGFHSRQKPHDELYSQKFTVPSLHVFGDTDKVIPK |
|