Gene
| Gene Model ID | pfu_aug1.0_1965.1_22802 |
|---|---|
| Locus | scaffold1965.1 : 3855 ... 10005 : - |
| To GenomeBrowser | scaffold1965.1:3855..10005 |
| Genes list of scaffold | scaffold1965.1 |
| Synonym | pfu_aug2.0_458.1_27419 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1965.1_22802.t1 | 3 | 1 | zf-C2H2 | 45 | 68 | 1.1e-06 | 28.6 | 1.2e-08 | 2.5e-05 | 24.3 |
| pfu_aug1.0_1965.1_22802.t1 | 2 | 1 | Endonuclease_7 | 399 | 440 | 5.7e-07 | 29.1 | 2.7e-10 | 5.7e-07 | 29.1 |
| pfu_aug1.0_1965.1_22802.t1 | 3 | 2 | zf-C2H2 | 405 | 417 | 1.1e-06 | 28.6 | 0.00095 | 2.0 | 8.9 |
| pfu_aug1.0_1965.1_22802.t1 | 3 | 3 | zf-C2H2 | 435 | 445 | 1.1e-06 | 28.6 | 0.37 | 790.0 | 0.7 |
| pfu_aug1.0_1965.1_22802.t1 | 2 | 2 | Endonuclease_7 | 1070 | 1127 | 5.7e-07 | 29.1 | 0.068 | 140.0 | 2.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1965.1_22802.t1 | gi|221129478|ref|XP_002157626.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1965.1_22802.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1965.1_22802.t1 atggactataatccgttaaagatggatcagaatggagaggactttgttgcatttttaaagcggcggtatcctcaaggaaa ccaaaaattggaatctgaacttaaaaaattaaaatgtaagcttgaaggaagtttcagctgtccagtctgtaatcgttcat tttctaggaaatataacatgacaagacatgtgaaaagtttacattcccaaaatggtggcagtgtacctgtttcgtttcat caatcatctgatgtggaagcactcgggggcttagccaacaaacattacataaatccaaatctggatgataagtatgatat attggtgtttatggcaaacatcaaaggggaaattcgtcgacatgtaaaagatcaatgcatgaaacacagacatgtgaaat actacatgaacctacagacggaaatgagaaggcaaaaggatgacggcgaagaagagatagcaaaaccccatttcagaagt aaaatggcaattgtactggaccataacaagttcgaagagcatgatttgaatgagggaatgcaaaagatatttgcctcctt tgatgagtacattagaaggggttcgtcttggactctcaagaagatactgaagtgtgaagtttacaccgtcaagtatgcgc ctgtaggagcaagtagatactttcaactacccaacgttctttcaaacacgcggtctataataaatatcaataattctgac gaaaaatgtttcctgtggtcaatattagcatccttataccctagtgatcacaattcccatagagtaactcattatgtaca atatgaagattcattagacatgatcggaattgactatcctgtgcatcccacaagtgtgcctcgatttgaaaatcagaaca acatcagtgtcaatgtgtttggatacgaagaaagtagttgttttcccctttacatttcaaaacgtaccagctcagagtac catgtcgatttattgtacatatgcaaagaggatacttcacattggtgtttgattaaaaattttaatagattcatgaacca cgtggnagatcctaggtatactaaagctccagtgatatatcgtggtgttgatgttgctaaaaattttctacaagaacttt tgcaggaacaagctgaaatcaatgacattctacaagaaattgaacctttaacaatgactgacagtaacgaacaggacttt cagcgaagtactcaatgtcacatatgcacaaagacttttacagcgtcgagcgtaaaagtgcgagatcattgtcatgtaag tggtcggtacaggggtgctgcttgtcaatcttgtaatttaaatttcaaacatcctcaattcatcccagtagtgtttcata atttaaaagggtttgacggacatattttatgtcaagcgcttggttttttcaaagattatgaaattaattgcattgctcaa aacacagaaaagtacgtttctttttcattagggcatttgagattcatagattcctatcaattcctggggagctctttggg aactttagtcgaaatcttagcttctgatgggggcctcaaacattttcatcaattaagagatgaatttccaaatcccaatc aaagtaacttattgctacagaagggtgtttactgctatgaatacgttgattcgcccgaaaaattcaatcgcactaccctc cccccaatcgattcattttacagtcatttaacaggtgaaactatctcggaccaagactatgagcatgcgcgaaacgtttg gtcaacaatgaacatgcaaaatttgggagagtatcacgacctttacctaaaaacagacgtgttattgctagcagacgttt ttgagcattttagagacagtattcttgaatattttcaccttgacccctgttatttttatacagcccctggcttatcctgg tcagccgctctcagaatgactaaatgctcccttaccttacttaccgatccagatatgtaccttttctttgagcaattgag agggggagtctccatgatttcaaacaagtttgcccatgcaaataatcctcatgttcaagattatgacaattcattaccac atacatggattcaatatttagattgtaactccttgtatgcacacacgatgacctttccattacccacgggtggttttcgc tggttaagtagagatgaggtagaaacattggatataacaacaatagcacttgatggtgaaaaggggtatgtgttggaagt tgacctcgaataccctgaccacttacacgatgaccactcagatctacctgtagcacctgaacatatcgaggtgtcagatg atcaactttctccatactcgaaacgtttgttgaaaaaaatgtatagtggtcatagtaatgagggtctcaatcaaaccatt catcggataaaaacgagaaaactcgttccaaacttgtatggaaaatcacattacattttgcatgtaagaaacttatacca atacatagaattaggacttgttttaagcaagatttacagagtaatcgagtttgaccaagcaccttggatagctccataca ttagattctgcgctgagaaaaggcggctatcaaacagtaaagcgcagtcacaattttttaagctactgcccaacagtttc tttggtaaaacctgcgaagatctaagaaagcgcatcaattttaaattggtgcataatgaaaaaaagtttctcaaagaggt agcaaagtcttcattcaagggttttacaattttctctgatgaccttgtaggaatggagcacactaaagtacgtttacact ttaacaaacccatctatacaggattctgtgtgttagatatatcaaaaaccattttgtatcattttcattatttcgaaatg aaacgaaaatatccaggaacgagactgaagctgctttggaccgataccgacagtttagggtatctcattgaaaccgacga tttatatgcagatatgtcagaaaatcttcatttgtatgacacctcgaactttccttccgatcattttctatactccattt caaattgcagacgacccggagtcatgaaagacgaagtgcccaacaaattcattgtcagttttgtaggtttaagggcaaaa atgtactcctttatttgtaacgacaaggatgaaactaaaattgccaaaggtgtgcaaaaaagcactatagagaatcacct gtgttttgaacaatacaaagcatgtctgtttgaggaaagtgagcaaatgtgtgaaagttacaacattcgtagtgagaatc attctttatacatgactcatgtgaacaagataggtcttagtgcattggacgacaagcgctttgttttaccagataaatgt aatactcttgccattggacattacttgactcgcacttga |
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Protein
| Protein ID | pfu_aug1.0_1965.1_22802.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1965.1_22802.t1 MDYNPLKMDQNGEDFVAFLKRRYPQGNQKLESELKKLKCKLEGSFSCPVCNRSFSRKYNMTRHVKSLHSQNGGSVPVSFH QSSDVEALGGLANKHYINPNLDDKYDILVFMANIKGEIRRHVKDQCMKHRHVKYYMNLQTEMRRQKDDGEEEIAKPHFRS KMAIVLDHNKFEEHDLNEGMQKIFASFDEYIRRGSSWTLKKILKCEVYTVKYAPVGASRYFQLPNVLSNTRSIININNSD EKCFLWSILASLYPSDHNSHRVTHYVQYEDSLDMIGIDYPVHPTSVPRFENQNNISVNVFGYEESSCFPLYISKRTSSEY HVDLLYICKEDTSHWCLIKNFNRFMNHVXDPRYTKAPVIYRGVDVAKNFLQELLQEQAEINDILQEIEPLTMTDSNEQDF QRSTQCHICTKTFTASSVKVRDHCHVSGRYRGAACQSCNLNFKHPQFIPVVFHNLKGFDGHILCQALGFFKDYEINCIAQ NTEKYVSFSLGHLRFIDSYQFLGSSLGTLVEILASDGGLKHFHQLRDEFPNPNQSNLLLQKGVYCYEYVDSPEKFNRTTL PPIDSFYSHLTGETISDQDYEHARNVWSTMNMQNLGEYHDLYLKTDVLLLADVFEHFRDSILEYFHLDPCYFYTAPGLSW SAALRMTKCSLTLLTDPDMYLFFEQLRGGVSMISNKFAHANNPHVQDYDNSLPHTWIQYLDCNSLYAHTMTFPLPTGGFR WLSRDEVETLDITTIALDGEKGYVLEVDLEYPDHLHDDHSDLPVAPEHIEVSDDQLSPYSKRLLKKMYSGHSNEGLNQTI HRIKTRKLVPNLYGKSHYILHVRNLYQYIELGLVLSKIYRVIEFDQAPWIAPYIRFCAEKRRLSNSKAQSQFFKLLPNSF FGKTCEDLRKRINFKLVHNEKKFLKEVAKSSFKGFTIFSDDLVGMEHTKVRLHFNKPIYTGFCVLDISKTILYHFHYFEM KRKYPGTRLKLLWTDTDSLGYLIETDDLYADMSENLHLYDTSNFPSDHFLYSISNCRRPGVMKDEVPNKFIVSFVGLRAK MYSFICNDKDETKIAKGVQKSTIENHLCFEQYKACLFEESEQMCESYNIRSENHSLYMTHVNKIGLSALDDKRFVLPDKC NTLAIGHYLTRT |
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