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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_19652.1_54597
Locus scaffold19652.1 : 1 ... 9305 : +
To GenomeBrowser scaffold19652.1:1..9305
Genes list of scaffold scaffold19652.1
Synonym pfu_aug2.0_381.1_04081

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_19652.1_54597.t1 2 1 PID 3 102 9.9e-14 51.5 2.6e-17 1.9e-13 50.5
pfu_aug1.0_19652.1_54597.t1 2 2 PID 100 124 9.9e-14 51.5 0.11 800.0 -0.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_19652.1_54597.t1 gi|241554867|ref|XP_002399640.1| dip13 beta, putative [Ixodes scapularis] 2.0e-26

Transcript
Transcript IDpfu_aug1.0_19652.1_54597.t1
Definition-
>pfu_aug1.0_19652.1_54597.t1
gtgaacagctagtatgtgagacaatgaggcagattttggcagctagagccgttaacaatgtgttcaaaatggtggagtca
cgactcgttgtgtccagtgaatgtatgaggttggttgatccatcatcgaatgccgttagaacaaagtttgccttagctga
tatatcattctggtcggctcacccagaaaataccagattgtttgggtttataactagaacaaagagctcagggtctactt
cgtcacagtttgcgtgtcacgtgtttgaatgtaacgtatcggcagaggaggagaaaaaagccatggagaaaatacaacag
gtgaaaactaaagagaagaacctcctcctccaaaacatcaaccagctagaggatgcccctgagggtgaggaggaggctct
acataacctcccactgtcccctgatggcaagtatctggtcctcaccgcaaccgacgaatcagatatcatccccgagtcac
atgagactgaacaaccaataaaaacaatggaccttagaaatacttcaaaccagacacaagaatctacaagtgtggctgac
gatgatgaaactgaggcttaa

Protein
Protein IDpfu_aug1.0_19652.1_54597.t1
Definition-
>pfu_aug1.0_19652.1_54597.t1
EQLVCETMRQILAARAVNNVFKMVESRLVVSSECMRLVDPSSNAVRTKFALADISFWSAHPENTRLFGFITRTKSSGSTS
SQFACHVFECNVSAEEEKKAMEKIQQVKTKEKNLLLQNINQLEDAPEGEEEALHNLPLSPDGKYLVLTATDESDIIPESH
ETEQPIKTMDLRNTSNQTQESTSVADDDETEA

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