Gene
| Gene Model ID | pfu_aug1.0_19654.1_61931 |
|---|---|
| Locus | scaffold19654.1 : 1 ... 10408 : - |
| To GenomeBrowser | scaffold19654.1:1..10408 |
| Genes list of scaffold | scaffold19654.1 |
| Synonym | pfu_aug2.0_2351.1_05497 |
Manual annotation
| Study field | other |
|---|---|
| Gene name | hypothetical protein |
| Description | Domain 7tm_1 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19654.1_61931.t1 | 1 | 1 | Kringle | 10 | 78 | 3.2e-16 | 59.1 | 1.3e-19 | 6.3e-16 | 58.2 |
| pfu_aug1.0_19654.1_61931.t1 | 1 | 1 | 7tm_1 | 57 | 174 | 4.6e-12 | 45.6 | 1.2e-15 | 5.7e-12 | 45.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_19654.1_61931.t1 | gi|241722209|ref|XP_002413666.1| | conserved hypothetical protein [Ixodes scapularis] | 4.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_19654.1_61931.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19654.1_61931.t1 caatggaatgtttggcacctgatgatagatatggaatgaactacaggggagtcattaacaagacaaaatgtggaatacca tgtcaacgttgggatacgcagattccacatacacacaagttcaaattgaatggctcggaaaactactgtcggaaccttgg agatcatacatatatctggtgttacacaacagatcctgacacacgctgggacgagtgtccgtcattaccacaatgtgtct tcaattttcttcttttctgtggaatttgtatcggacaaattttgatcttccgtgagataaggagtgtccgtgccatgatg atacaacagtcagctacaagacgcagcgaagcggcggcggcacgttcactgtttacggtggttattactgatatactttg ttggttacccattgcagtgatgggattgatggtcatatcgggcgttgagattccggtggatatgtacgcttggctcgttg ttctggtactcccggtgaattctgctataaacccgtatctctataccatttcatctttacgcattttgaatcgaaaggtc agagtgagcacgctactacaaccagtcaatcccttgaatgatctttacatcatgagtttactacgaaacgtggatttaaa tgtcacggtcgtcctctaa |
|
Protein
| Protein ID | pfu_aug1.0_19654.1_61931.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19654.1_61931.t1 MECLAPDDRYGMNYRGVINKTKCGIPCQRWDTQIPHTHKFKLNGSENYCRNLGDHTYIWCYTTDPDTRWDECPSLPQCVF NFLLFCGICIGQILIFREIRSVRAMMIQQSATRRSEAAAARSLFTVVITDILCWLPIAVMGLMVISGVEIPVDMYAWLVV LVLPVNSAINPYLYTISSLRILNRKVRVSTLLQPVNPLNDLYIMSLLRNVDLNVTVVL |
|