Gene
| Gene Model ID | pfu_aug1.0_1966.1_29917 |
|---|---|
| Locus | scaffold1966.1 : 81436 ... 92665 : + |
| To GenomeBrowser | scaffold1966.1:81436..92665 |
| Genes list of scaffold | scaffold1966.1 |
| Synonym | pfu_aug2.0_1255.1_18213 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1966.1_29917.t1 | 1 | 1 | Phospholip_A2_2 | 115 | 210 | 9.9e-32 | 108.8 | 1.4e-35 | 2.1e-31 | 107.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1966.1_29917.t1 | gi|321476842|gb|EFX87802.1| | hypothetical protein DAPPUDRAFT_306373 [Daphnia pulex] | 1.0e-23 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1966.1_29917.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1966.1_29917.t1 atgtacactatgaagcggttcctcttcttgctcataatatttttatgttcaaatgttcgatggacaataactagtaaaat agggtctatcaaaataattcacgtgaagtgtttagacagactttatgaagtaaaaacaaagagggattttgaagacgtgg catgctttagaatagatgaccgagacacgtcatatgaatctacgagtatcacaataccacgggacaggtcattggaattt ttacatttgtgtgaagaatttgacgggaagtcatcaagcagacgacaccggagatcgctaaggaggaaacgttttacaga cttcttcaagtctattttcttcataccaggaacaaagtggtgtggatggggcaacactgcttcacaatatgaggatctgg gggagtataatatcacagattcctgttgtagagaccatgatcactgcccagtaaccattaaaggatgggaatccaaatat ggtctgactaatctatcacctattacaaagagttcttgtgaatgtgaagatgacttttatcaatgccttttgacggcagc agcgagtgagcctgaaagtgctatcagtacaggaaacatttactttaatatgctggatatggattgtttattacccgtgg gagagacgaagaaatgtgtccaatggggatggtggttcggaaactactgtgaggaatttagtgaaactgaaatagaaacg aaatacgaatttgcagggaacaatctcacatttcctacaaacacttcgatattttag |
|
Protein
| Protein ID | pfu_aug1.0_1966.1_29917.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1966.1_29917.t1 MYTMKRFLFLLIIFLCSNVRWTITSKIGSIKIIHVKCLDRLYEVKTKRDFEDVACFRIDDRDTSYESTSITIPRDRSLEF LHLCEEFDGKSSSRRHRRSLRRKRFTDFFKSIFFIPGTKWCGWGNTASQYEDLGEYNITDSCCRDHDHCPVTIKGWESKY GLTNLSPITKSSCECEDDFYQCLLTAAASEPESAISTGNIYFNMLDMDCLLPVGETKKCVQWGWWFGNYCEEFSETEIET KYEFAGNNLTFPTNTSIF |
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