Gene
| Gene Model ID | pfu_aug1.0_1966.1_29918 |
|---|---|
| Locus | scaffold1966.1 : 94266 ... 98925 : - |
| To GenomeBrowser | scaffold1966.1:94266..98925 |
| Genes list of scaffold | scaffold1966.1 |
| Synonym | pfu_aug2.0_1255.1_18214 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1966.1_29918.t1 | 1 | 1 | LIM | 9 | 63 | 4.5e-10 | 39.4 | 7.2e-14 | 5.4e-10 | 39.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1966.1_29918.t1 | gi|76162916|gb|AAX30635.2| | SJCHGC06220 protein [Schistosoma japonicum] | 4.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1966.1_29918.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1966.1_29918.t1 atgccatttggtggtggagaaaagtgtggggtgtgtgcgaagtcggtgtatgctgcggagagacaagaggctgggaaaat catataccataaattctgcttcaaatgcagtgaatgtaagatgcaattaaatttgaacaactacgctcaggctgatggaa taatattctgtaaaaagcatttccaggagtgtgtagtagctaagaatacccagacacctattgtttga |
|
Protein
| Protein ID | pfu_aug1.0_1966.1_29918.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1966.1_29918.t1 MPFGGGEKCGVCAKSVYAAERQEAGKIIYHKFCFKCSECKMQLNLNNYAQADGIIFCKKHFQECVVAKNTQTPIV |
|