Gene
| Gene Model ID | pfu_aug1.0_197.1_22062 |
|---|---|
| Locus | scaffold197.1 : 73376 ... 78710 : + |
| To GenomeBrowser | scaffold197.1:73376..78710 |
| Genes list of scaffold | scaffold197.1 |
| Synonym | pfu_aug2.0_427.1_24018 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_197.1_22062.t1 | 1 | 1 | TBCC | 180 | 297 | 0.0 | 160.5 | 0.0 | 0.0 | 159.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_197.1_22062.t1 | gi|291230530|ref|XP_002735209.1| | PREDICTED: tubulin-specific chaperone C-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_197.1_22062.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_197.1_22062.t1 atggattcagaccttcccctcgctgtagctgaaaagttaaagaagagagaattcgaacgtcaagctgaggtaacaaagag aaaattagaacttgatagtgctacccctgcccaggaaaatgcagactatttctcaacaaagtttggcgaagtgaaatcgt tgttagaaaaacgaatacaaacatgcgagtcattgcctcagtccgaattgacatcagaatttgatgcaatcaacgaatcg tttcgcttactgcagaaatatatggcagattctacaatgtttttaccaaaatacgacgtaaaaatagcacaagaagctct gaaccaactacaagtcaatatacaagagaagaaggacatactattgccaaaaaagaaatttgcttttcgttctaagaaga aattaggggagaaagttgagaaaagagaaaaaaatggagtttcagtgaaaaaagtcagccatgttgaattagcagactgt aaattagtggacttatcaaagcagacacttcaaatggatggattggaaattgaacaaaaagatgtcgcgttagcaagact atccaattgttttgtaagattatttggagctccatctacagttcatattaaagatttgaatgactgtacgatattgtgtg gaccagtgtctagctcgatattcatttcagactgtacaaattgtgtatttgttatagcctgtcagcagttaaggactcac acaagcaaagactgcactttttacctccatgtaacgagtcgagctattattgaagactgtacaggactagagtttgcacc atataatcttgaatatcctaatttggataagcattttgaaaaagcaagattagatcccacactcaacaactggagtgacg ttgacgattttaattggttagcaagtgatgcacattctccgaattggtcaatacttcctgaagaaaaaaggaaacagagc tggcatggcaattaa |
|
Protein
| Protein ID | pfu_aug1.0_197.1_22062.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_197.1_22062.t1 MDSDLPLAVAEKLKKREFERQAEVTKRKLELDSATPAQENADYFSTKFGEVKSLLEKRIQTCESLPQSELTSEFDAINES FRLLQKYMADSTMFLPKYDVKIAQEALNQLQVNIQEKKDILLPKKKFAFRSKKKLGEKVEKREKNGVSVKKVSHVELADC KLVDLSKQTLQMDGLEIEQKDVALARLSNCFVRLFGAPSTVHIKDLNDCTILCGPVSSSIFISDCTNCVFVIACQQLRTH TSKDCTFYLHVTSRAIIEDCTGLEFAPYNLEYPNLDKHFEKARLDPTLNNWSDVDDFNWLASDAHSPNWSILPEEKRKQS WHGN |
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