Gene
| Gene Model ID | pfu_aug1.0_197.1_22063 |
|---|---|
| Locus | scaffold197.1 : 100176 ... 104367 : + |
| To GenomeBrowser | scaffold197.1:100176..104367 |
| Genes list of scaffold | scaffold197.1 |
| Synonym | pfu_aug2.0_2364.1_15496 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_197.1_22063.t1 | 2 | 1 | zf-B_box | 28 | 60 | 9.7e-11 | 41.3 | 9.9e-08 | 0.00021 | 21.1 |
| pfu_aug1.0_197.1_22063.t1 | 2 | 2 | zf-B_box | 77 | 113 | 9.7e-11 | 41.3 | 1.4e-10 | 3.0e-07 | 30.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_197.1_22063.t1 | gi|260822978|ref|XP_002603960.1| | hypothetical protein BRAFLDRAFT_71752 [Branchiostoma floridae] | 6.0e-14 |
Transcript
| Transcript ID | pfu_aug1.0_197.1_22063.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_197.1_22063.t1 atgatggcggagggtttcagtcctccattacaatttccccagactacagtggaatatgagaaatgcggtgctgacgttga tgtatcgtggttttgtaagaattgccctgcctccctctgtaataactgcaaagaagaccattccagagataaactgatga gaaagcatgaagttgtcccaagatctggaagcgtattaaggtcccatggatcatggaaagtgagagaatcatgtaaaata cacaaaaacagtgatttaataacttactgtaatgattgtaaagaaccatgttgtattgattgtatggaagaaaaacatca tcgccatgctttcacaaaacttgatacgaaatattttgaagccgagtctcgccttaactctatggtagatgatctgtcaa aatccacgatacataccattcaaaatgatatttcaaggttgaaacaaaatatggaaacttgcaatgaaaatttcaatctc gtgaacacagaattgaacacagctgagaacaaagttatgacgactgtcgcagagtcatttgaaaaattacgcaaaattct gtctattaaaaaaaatgaattagtatctaaaagagaggatagaatcaaaagatgcggacatcagatgaatgaaattgaaa gtttcattgcaagtactgaacagaaaattagggcagggggtctggatctgatagagtactttcctatccttcctaccctc ccgtcattccactctgacataaccactcctgttccttgttttgaattaaatgaagccattcttaacgaatgtgaaacaaa cataggacaactatgttttcaagatagaaaatttgattcaagtcacgaatcattacacaatgttagtgttagtaataaag agaaaaatgacgaatctgtggaaacggataaagaggaggtaagtgtatctggcattaaagaagaaaagatagatagtttc aaaacacctatttctatttggagtatagaacctgtaggtgatggcacagcatggatggcaagtgttgatagtgacacaat ttatctatatgacatcagaggtaaagagataaggtcagttatgataaagggacagagaggattctttaaaaaagcgaata agacagagatttacgacatggctttacagagcaatggtgacattgtagtggtatgctgtgacgacaaggtaagacgtgtg tcagttagtggtaagataacttctctgattaacacagcaccattcagaccatggggagtgtgtctgacagacagggagga gatagtagtatgtatggtaagtcgggagaataaagaccacgtggctgtgtatacacctgacggtaagtcaaagggaaggg agataacagcgagagataggaacaacaaacagttgtttaccgctccatgtcgtgtggttatcaatgagggtcagataata gtgttgaacgccgctgagaacgtggtgtctgtggagcaacacagtggtaaggttctctgggtatatgatggtagtcaggc tacactagaacagaactttgatccctcaggaatctgtaaggataaattctcaaatattcttgtcaccgatggtgtaaacc aatgcatacattatattaacaacagagggagtttattgagcatcatcatagttaaagattatggattagaacatccgact gggatatgcatggatagtcagagtggttatatatggtgtgggggtgatcatgatgatgtaggcgatgttttgattctgaa atacttaagataa |
|
Protein
| Protein ID | pfu_aug1.0_197.1_22063.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_197.1_22063.t1 MMAEGFSPPLQFPQTTVEYEKCGADVDVSWFCKNCPASLCNNCKEDHSRDKLMRKHEVVPRSGSVLRSHGSWKVRESCKI HKNSDLITYCNDCKEPCCIDCMEEKHHRHAFTKLDTKYFEAESRLNSMVDDLSKSTIHTIQNDISRLKQNMETCNENFNL VNTELNTAENKVMTTVAESFEKLRKILSIKKNELVSKREDRIKRCGHQMNEIESFIASTEQKIRAGGLDLIEYFPILPTL PSFHSDITTPVPCFELNEAILNECETNIGQLCFQDRKFDSSHESLHNVSVSNKEKNDESVETDKEEVSVSGIKEEKIDSF KTPISIWSIEPVGDGTAWMASVDSDTIYLYDIRGKEIRSVMIKGQRGFFKKANKTEIYDMALQSNGDIVVVCCDDKVRRV SVSGKITSLINTAPFRPWGVCLTDREEIVVCMVSRENKDHVAVYTPDGKSKGREITARDRNNKQLFTAPCRVVINEGQII VLNAAENVVSVEQHSGKVLWVYDGSQATLEQNFDPSGICKDKFSNILVTDGVNQCIHYINNRGSLLSIIIVKDYGLEHPT GICMDSQSGYIWCGGDHDDVGDVLILKYLR |
|