Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_197.1_22068
Locus scaffold197.1 : 145377 ... 149595 : -
To GenomeBrowser scaffold197.1:145377..149595
Genes list of scaffold scaffold197.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_197.1_22068.t1 1 1 zf-C4 21 89 6.5e-29 99.9 6.2e-33 9.3e-29 99.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_197.1_22068.t1 gi|158302672|dbj|BAF85823.1| ultraspiracle [Liocheles australasiae] 3.0e-20

Transcript
Transcript IDpfu_aug1.0_197.1_22068.t1
Definition-
>pfu_aug1.0_197.1_22068.t1
atggctggaatgtgccgaaaagagaaaccagaaacggtacagcctcaagacggacaagtattgtgcaaagtgtgcggaga
catagcgaatggaattcacttcggcgtaaacacgtgcgagggctgcaagaaatttttccgacgtggtcttgtagagaatc
agagctatctatgtaaaagtgaaaagaaatgtggcatcaaccctcgtaacaggaacaactgccgatactgtcggtatcag
aagtgtatcggggtcggaatgtccagagaaggactcttcaacttccgctgtctcgtgtag

Protein
Protein IDpfu_aug1.0_197.1_22068.t1
Definition-
>pfu_aug1.0_197.1_22068.t1
MAGMCRKEKPETVQPQDGQVLCKVCGDIANGIHFGVNTCEGCKKFFRRGLVENQSYLCKSEKKCGINPRNRNNCRYCRYQ
KCIGVGMSREGLFNFRCLV

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495