Gene
Gene Model ID | pfu_aug1.0_1970.1_66166 |
---|---|
Locus | scaffold1970.1 : 38116 ... 51515 : - |
To GenomeBrowser | scaffold1970.1:38116..51515 |
Genes list of scaffold | scaffold1970.1 |
Synonym | pfu_aug2.0_137.1_23551 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1970.1_66166.t1 | 2 | 1 | Biopterin_H | 1 | 39 | 0.0 | 441.4 | 1.0e-16 | 1.5e-12 | 46.9 |
pfu_aug1.0_1970.1_66166.t1 | 2 | 2 | Biopterin_H | 36 | 263 | 0.0 | 441.4 | 0.0 | 0.0 | 396.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1970.1_66166.t1 | gi|325296765|ref|NP_001191619.1| | tryptophan 5-monoxygenase [Aplysia californica] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
trochophore | 1 |
>Adult tissues | |
Dshape | 1 |
Transcript
Transcript ID | pfu_aug1.0_1970.1_66166.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1970.1_66166.t1 atgtatggaacagaactagacgctgatcatccgggatttaaagacaaagtgtatcgacagagacgcaaaattttcacaga tatcgcaatggcgtataaataaatcgataacgttccgcagcttgaagacgtttcagcatttctgaaagaaagaaccgggt ttcaactacgtccagtggctggttacttgtcatcacgtgacttccttgccgggttggcattccgagtgttccattgtaca cagtacattcggcacagctcggaccctttctataccccagaacctgattgttgtcatgaactactgggacatatgcctct gctagcagatcccagcttcgcacaattctcacaagaaataggtctggcgtcgcttggggcttccgatgaagatttgcaaa aactggctacctgttattttttcaccattgaattcggtttgtgtaagcaagacggtggtttgagggcttatggtgcaggt ctcctatcgtccattggagaactgaagcacgctctgacagactgtaccagcaaaattccatttgagccgagtcgtacgtg taaacaggaatgtcttataacaacgtatcaggaggtctacttctttactgacagttttgaagaagcaaaggacagaatga gacagtttgcttgtacgataaaaagaccttttgccgtacgctacaatccgtacacccagacagtagacgtactcaacaat acgcggtgtatagcgtacgccgtcagcgaagttagaggtgatctgtgtatagtaagcgatgccctccgcagactacagaa tatggaacttgaaagggaagaggaaatgagcgaatcgtctgctgtctctacacccagataa |
Protein
Protein ID | pfu_aug1.0_1970.1_66166.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1970.1_66166.t1 MYGTELDADHPGFKDKVYRQRRKIFTDIAMAYKXIDNVPQLEDVSAFLKERTGFQLRPVAGYLSSRDFLAGLAFRVFHCT QYIRHSSDPFYTPEPDCCHELLGHMPLLADPSFAQFSQEIGLASLGASDEDLQKLATCYFFTIEFGLCKQDGGLRAYGAG LLSSIGELKHALTDCTSKIPFEPSRTCKQECLITTYQEVYFFTDSFEEAKDRMRQFACTIKRPFAVRYNPYTQTVDVLNN TRCIAYAVSEVRGDLCIVSDALRRLQNMELEREEEMSESSAVSTPR |