Gene
| Gene Model ID | pfu_aug1.0_19807.1_69301 |
|---|---|
| Locus | scaffold19807.1 : 1 ... 8255 : + |
| To GenomeBrowser | scaffold19807.1:1..8255 |
| Genes list of scaffold | scaffold19807.1 |
| Synonym | pfu_aug2.0_393.1_10723 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19807.1_69301.t1 | 1 | 1 | AhpC-TSA | 1 | 111 | 1.4e-23 | 82.9 | 4.8e-27 | 1.8e-23 | 82.5 |
| pfu_aug1.0_19807.1_69301.t1 | 1 | 1 | Redoxin | 3 | 111 | 4.4e-09 | 36.0 | 1.6e-12 | 6.1e-09 | 35.5 |
| pfu_aug1.0_19807.1_69301.t1 | 1 | 1 | 1-cysPrx_C | 133 | 166 | 5.2e-11 | 42.0 | 2.6e-14 | 9.8e-11 | 41.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_19807.1_69301.t1 | gi|156401378|ref|XP_001639268.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_19807.1_69301.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19807.1_69301.t1 ctgggctattttattttcccacccggcagactacacgccagtatgtactacagaacttgggatgtctgcaaaaatgaatc ctgaatttcagaagagaggagtgaagctgatcgccctttcatgtgacgatgtgccaagtcacaagggttggacaacagat attatagccaatcaaggacttgaaggtacagaactcccttatcccatcattgctgatgagaaaagagaattggctgtcaa actaggaatggtggatcctgatgagaaggataaagctggattgccactaacttgccgtgctgtattcatcattggtccag acaagagactgaaactctcaatgctttatcctgccacaacaggaaggaactttgatgaaatccttagagttgtggattcc ttacagttgacagctactaaaaaagtagccactcctgcaaactggaagcaaggaggtgactgtatggttgtcccatcagt aaaacctgaagaagaatcaggacttttcccaaaaggtgtaacgaaagtacaggtaccatcaggaaagggatatctccgta aaacccctcagccaagttaa |
|
Protein
| Protein ID | pfu_aug1.0_19807.1_69301.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19807.1_69301.t1 WAILFSHPADYTPVCTTELGMSAKMNPEFQKRGVKLIALSCDDVPSHKGWTTDIIANQGLEGTELPYPIIADEKRELAVK LGMVDPDEKDKAGLPLTCRAVFIIGPDKRLKLSMLYPATTGRNFDEILRVVDSLQLTATKKVATPANWKQGGDCMVVPSV KPEEESGLFPKGVTKVQVPSGKGYLRKTPQPS |
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