Gene
| Gene Model ID | pfu_aug1.0_19815.1_18671 |
|---|---|
| Locus | scaffold19815.1 : 4274 ... 10352 : - |
| To GenomeBrowser | scaffold19815.1:4274..10352 |
| Genes list of scaffold | scaffold19815.1 |
| Synonym | pfu_aug2.0_353.1_10645 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_19815.1_18671.t1 | 1 | 1 | Collagen | 107 | 145 | 1.1e-12 | 47.3 | 1.6e-05 | 0.12 | 11.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_19815.1_18671.t1 | gi|159796274|gb|ABX00635.1| | 8.0e-13 |
Transcript
| Transcript ID | pfu_aug1.0_19815.1_18671.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19815.1_18671.t1 atagacgtccgacatttggatacggttgtctggtccatggacaaacttggttttctggatctcagtatgacgccatgcgt cacattcaggcgtcagtctgatccgttataccatacccagtccttactgtaccgctccgacagatctgtactcctctctg tacaagaagaagggaccgtcataccgttccaagtttctatggatttcaacgtgcgggccaaaactgaaccctacctggga acagagggggcacaaggtatcatggggatctcaggagtaaggggcgggtacggtgacacaggttacgtaggtcttcaggg accccgtgggcagcgcggtgaaaagggacccatcggatcccagggaagtgtaggacctcaaggacaaacaggatttaacg gaggtgctggagagagaggcgaccagggtacctctggaggagataacagtccaggaatcccaggtgacacgggagaagta ggtgacactggcttcgtaggtaaaactggtgatggtggttttagtggtgcggatggagatgttggtcccgagggtacagt ggatttcgtctttgtagatgtagatgaatgtggaggttttatatgcgatgctgaacaggtctgtgtcaatgtagaggggc gacacgaatgtctgggtccgtacaccgttagaggccttgtggggaaagtggcgagtgcacagacaatggacggactcctg tccactggtactatgacggggattactgcgtggatgatcattctctccatcgttctcatcatcgaaatcctcctcttctt atacatcgtatcccgagagaaccgcaccctttaccgtccgatgcaagtgcttatgccagcacccgaggaacccaaggtgt atgtggcagatagagatccagggccgtcaacgaagcaccttagcctgcccaaaataagttacatatcctacccaagcgaa aagaggccgttggcgatgttagacagtgtaccgtacggtcaagtacagaaacttagactgtcacgctctaattcattatt ctga |
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Protein
| Protein ID | pfu_aug1.0_19815.1_18671.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_19815.1_18671.t1 IDVRHLDTVVWSMDKLGFLDLSMTPCVTFRRQSDPLYHTQSLLYRSDRSVLLSVQEEGTVIPFQVSMDFNVRAKTEPYLG TEGAQGIMGISGVRGGYGDTGYVGLQGPRGQRGEKGPIGSQGSVGPQGQTGFNGGAGERGDQGTSGGDNSPGIPGDTGEV GDTGFVGKTGDGGFSGADGDVGPEGTVDFVFVDVDECGGFICDAEQVCVNVEGRHECLGPYTVRGLVGKVASAQTMDGLL STGTMTGITAWMIILSIVLIIEILLFLYIVSRENRTLYRPMQVLMPAPEEPKVYVADRDPGPSTKHLSLPKISYISYPSE KRPLAMLDSVPYGQVQKLRLSRSNSLF |
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